Protein

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Genbank accession
QPB08297.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSGILRVDEIQTNSGSPYLVSNGSTTTFKTSLDFQSGSNLTMPSWTTANRPTTGVAVGTSGFNTTEGELEIYNGTEWTPVSGGSSEVIDRGDPANLSNGFLLEDFNVVHYFQSSNNDVNIDSQLVENAVYEMTYTSSGGSANIDFYLRPNGVNHGSEFRSHYRATDGSANFNRADQTLSFFYFDHFFGGSGSDPMGKVWFTTGPTNKYMYYVGSDTASLSIGYCRWTNNSRNWNTVGFTGFNGNNKRFWVRRIG
Physico‐chemical
properties
protein length:254 AA
molecular weight: 27993,04780 Da
isoelectric point:5,02078
aromaticity:0,14173
hydropathy:-0,51811

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-H9-2
[NCBI] 		2783669 Uroviricota > Caudoviricetes > Pantevenvirales > Yushanluvirus > Yushanluvirus satich
Host Synechococcus sp. WH 8102
[NCBI] 		84588 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPB08297.1 [NCBI]
Genbank nucleotide accession
MW147367.1 [NCBI]
CDS location
range 42771 -> 43535
strand +
CDS
ATGTCTGGAATACTTCGTGTAGACGAAATCCAAACTAACTCGGGTAGTCCCTACTTAGTTTCAAATGGATCTACTACTACTTTTAAAACAAGTCTGGATTTTCAATCTGGATCAAATTTGACTATGCCTTCTTGGACGACTGCTAATCGTCCAACTACAGGAGTTGCTGTAGGAACTTCTGGTTTCAATACAACTGAGGGTGAGTTAGAAATTTATAATGGGACTGAATGGACTCCTGTTTCGGGAGGATCTTCAGAAGTCATTGATAGGGGAGATCCAGCTAACTTAAGTAATGGATTTCTATTAGAAGATTTTAATGTAGTACATTATTTTCAAAGTAGTAATAATGATGTCAATATTGACAGTCAACTTGTTGAAAATGCTGTGTATGAAATGACTTACACTTCTTCTGGCGGTTCTGCTAACATTGACTTTTATTTAAGACCAAATGGTGTAAATCATGGCAGTGAATTTAGATCTCATTATAGAGCAACAGATGGTAGTGCAAACTTCAATAGAGCAGACCAAACGTTGAGTTTCTTTTACTTTGACCACTTCTTTGGAGGATCTGGTTCTGATCCTATGGGTAAAGTATGGTTTACTACAGGTCCAACAAATAAATACATGTACTACGTAGGTAGTGATACTGCTTCTCTGTCTATTGGTTATTGTAGATGGACTAATAATAGTAGAAATTGGAACACTGTTGGATTTACAGGATTCAATGGAAACAATAAAAGATTCTGGGTTAGGAGGATTGGTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
be7031bb8c283590cc5d1b6d605ed68c5e82b9732738d8fbaa8abe8138fb580c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7822
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-H9-2 from the Yellow Sea, China Jiang,T. and Luo,L. 2019-04-04 — GenBank