Protein

View in Explore
UniProt accession
A0A1X9SJ52 [UniProt]
Protein name
Carbohydrate binding domain protein
RBP type
TSP
Evidence DepoScope
Probability 0,99
Protein sequence
MAFNYTPLTETQKLKDMYPKVNDIGNFLKTEVNLSDVKQISQPDFNNILASIPDSGNYYVTNSKGAPSGEATAGFVRLDKRNVNYYKIYYSPYSSNKMYIKTYANGTVYDWISFKLDEGNLYNEGNTLNVKELTESTTQYATLVNPPKENLNTGWVNYKESKNGVSSLVEFNPVNSTSTFKMIRKLPVQEQKPNLLKDSLFVYPETSSSNIKTDNWNTPPFWGYTANSGRSGVRFRGENTIQIDDGNSTYPTAMTNRFKMGNELSVGDTITVSVYAKINDPALLKDNLVYFELAGYDTVDRTDNPYTGGRREITASEITTEWKKYSFTFTIPENTIGASGVKVNYVSLLLRMNCSSSKGNGAVVYYALPKLEKSSKVTPFITHENDVRKYDEIWSNWQEVISKDELKGHSPVDIEYNDYFKYQWWKSEVNEKSLKDLAMTVPQGYHTFYCQGSIAGTPKGRSIRGTIQVDYDKGDPYRANKFVKLLFTDTEGIPYTLYYGGYNQGWKLLKQSETSTLLWEGTLDFGSTEAVNLNDSLDNYDLIEVTYWTRSAGHFSTKRLDIKNTSNLLYIRDFNISNDSTGSSVDFFEGYCTFPTRASVQPGMVKSITLDGSTNTTKVASWNEKERIKVYNIMGINRG
Physico‐chemical
properties
protein length:639 AA
molecular weight: 72453,01430 Da
isoelectric point:6,25118
aromaticity:0,12676
hydropathy:-0,60063

Domains

Domains [InterPro]
DC_0568
STR
5–408
DC_0568
cd19958
STR
44–111
cd19958 G3DSA:2.60.120.260 DC_0448
A0A1X9SJ52
1 639
Architecture
STR
STR 5-638 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A1X9SJ52
1 639
Domain Start End Length (AA) Confidence
N-terminal 1 292 292 0,5844
Central domain 293 504 213 0,1840
C-terminal 505 639 134 0,9613
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-292
Central
293-504
C-terminal
505-639

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage qdsa002
[NCBI] 		1970746 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
f90cce403c8c2679484162b4f2be92955c758e8ceecf367bef6270a5a17609da
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6983
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50