Protein

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Genbank accession
QIG76098.1 [GenBank]
Protein name
tail collar domain-containing protein
RBP type
TF
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,61
Protein sequence
MTQFDYGTINPEETDGVELSGMLNQYRDALLTEHAGTFRPDYIKVGMAWMDTSGATWLHKRWDGTNDIVIGTYDPTTHKYIPRLSDWEAEQVVASAATTDILSVGTARVSITGTVTITSFGTKANTVKLVRFASALVVQNTANIVTNDGQDINVKAGDTMIVASDNAGVARIWGSPTSGVTPGTITIHADGTAPSGSLKCNGALVSRTAYAALFAKIGTTYGAGDGSTTFTLPDLRGEFVRGWDDGRGVDSGRALGSAQSSQNLAHSHGGGTGASGGWGLSVSAYTSTENSLETQAGSIIYAQSKSKSVTTVATGTVPVHNHTIPSDGGTEARPRNVAMMFCIKY
Physico‐chemical
properties
protein length:345 AA
molecular weight: 36127,67370 Da
isoelectric point:5,73036
aromaticity:0,07246
hydropathy:-0,17913

Domains

Domains [InterPro]
DC_1413
STR
4–345
DC_1413
IPR037053
ATT
175–236
IPR037053
SSF88874
STR
177–345
SSF88874
IPR011083
ATT
183–240
IPR011083
QIG76098.1
1 345
Architecture
STR
ATT
STR
STR 4-174 | ATT 175-240 | STR 241-345
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_I4
[NCBI] 		2509735 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG76098.1 [NCBI]
Genbank nucleotide accession
MN988552 [NCBI]
CDS location
range 56034 -> 57071
strand +
CDS
GTGACACAGTTTGATTACGGAACTATCAATCCCGAAGAGACGGACGGCGTCGAGCTCTCTGGTATGCTTAACCAGTACAGAGACGCGTTGCTGACTGAGCACGCTGGCACCTTTCGGCCAGACTACATCAAGGTAGGCATGGCGTGGATGGACACGTCCGGTGCAACATGGTTGCACAAGCGCTGGGACGGTACCAACGATATCGTCATCGGGACCTATGACCCGACTACACACAAATACATTCCTCGCCTGTCCGATTGGGAGGCGGAACAGGTGGTAGCCTCTGCCGCGACGACGGACATTCTGTCTGTGGGCACGGCTCGTGTGTCGATCACCGGGACGGTGACGATCACCTCGTTCGGCACCAAGGCGAACACAGTCAAGCTCGTCCGTTTTGCCAGCGCGCTCGTGGTGCAGAATACCGCCAACATCGTCACCAACGACGGGCAGGACATCAACGTCAAGGCTGGCGATACGATGATCGTCGCGAGCGACAACGCTGGCGTGGCTCGTATCTGGGGCTCGCCTACCTCTGGCGTGACGCCCGGCACTATCACCATTCACGCCGATGGCACTGCCCCTTCCGGCTCTCTGAAGTGCAACGGTGCACTCGTCAGCCGCACAGCCTATGCGGCGTTGTTCGCCAAGATCGGGACGACCTACGGCGCGGGCGATGGTTCGACTACGTTCACGTTGCCTGATCTTCGTGGCGAGTTCGTTCGTGGCTGGGATGACGGACGCGGCGTAGACAGCGGGCGCGCGCTCGGCTCCGCGCAGTCCAGCCAGAACCTCGCCCACAGCCACGGCGGCGGTACCGGCGCATCCGGCGGTTGGGGCCTATCCGTAAGCGCCTACACCAGTACCGAAAACTCGCTTGAAACACAGGCGGGCTCTATCATCTACGCCCAAAGCAAATCGAAGAGCGTAACGACGGTCGCCACCGGCACTGTTCCGGTGCACAACCACACCATCCCGTCAGATGGTGGCACGGAAGCCCGTCCGCGCAACGTCGCCATGATGTTCTGCATCAAATACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
aca7e5d1b9e49d78385a0aced134c108eba94b4a2ae27441ec2f641b0f875b35
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7823
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank