Protein

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Genbank accession
WKV23777.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSIKISGILPGPTGEPAAHIGITLRAVKTSLAVITTLESNSITGVDGAYSLNVEPGQYDVLLWVDGINSRNVGTINVYSDSLPGTLNNFLTALREEDGTPEIIRQLEQLRAEALQAALEAKESKNEATHQASMATSAAETAAQETADFIKTVVKDDADRAEAARESAEQAQSIVDGQASEVDRLHTAVGQLAAAAAGSSTSAAQSASESENSKNAAAQSKETAVSAASAAGNSATAAAGDKTAAKGFRDEAEEFAVQAKASAESIDVSVLEEQINQKVSQTVFDEAIGGKASTQQLADGLANKLTIQSTFLSTDLNLAITSGIYHPTAAALNLPLQALGVMEVYVRQGGTSLVQIFHATVMTVGNTNRHFVRIGTLSGGVWSFSTWAEQYTSLTMAQLGIGLPNQSDIANFDWQNFAFTSGANYVTNYNTWVNPPAGVTYNAGTRVSIRVTYISNIAAGPRMGLELTPDTGAATNFKVYRLLCVGAAGSRVFTFNQDWNSAIPVPITGGGHGANTLAGAQSALGVVADAFGDSQVANTPWIALTLQNGWTTTPPIGRAVYRKVNGMLQIDIINASGGATAGMVTMFALPAGYRPTFNKAYVLIAASTGGGVGSFPQRIGIDTQGIGSIEAVNPGSPIYLTVNIPLQ
Physico‐chemical
properties
protein length:646 AA
molecular weight: 67173,16010 Da
isoelectric point:4,88647
aromaticity:0,06502
hydropathy:-0,00836

Domains

Domains [InterPro]
IPR013609
ATT
1–131
IPR013609 Coil cd19958 DC_1902
Coil
Unmapped
103–131
Coil DC_1143
WKV23777.1
1 646
Architecture
ATT
STR
RBD
ATT 1-131 | STR 152-390 | RBD 523-646
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage vB_YenS-P840
[NCBI] 		3038268 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Yersinia enterocolitica
[NCBI] 		630 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WKV23777.1 [NCBI]
Genbank nucleotide accession
OQ716682.1 [NCBI]
CDS location
range 18883 -> 20823
strand +
CDS
ATGAGTATTAAGATTTCAGGCATTCTTCCGGGGCCAACCGGAGAGCCAGCTGCGCATATCGGTATCACATTACGCGCGGTTAAAACCTCGTTGGCGGTGATAACGACTCTTGAATCCAATTCAATTACCGGTGTAGACGGCGCTTACTCGCTTAACGTCGAACCCGGTCAATATGATGTTTTGCTGTGGGTTGACGGCATCAATTCAAGAAACGTGGGAACCATTAACGTTTATAGCGATTCGCTCCCCGGCACGCTGAATAACTTTCTGACGGCACTGCGGGAAGAAGATGGCACGCCGGAGATTATCCGTCAGCTTGAGCAATTACGCGCCGAAGCATTACAGGCAGCACTCGAGGCTAAAGAATCGAAAAATGAAGCCACTCATCAGGCCAGTATGGCGACAAGTGCCGCAGAGACTGCCGCACAAGAAACTGCAGACTTTATCAAAACAGTAGTGAAAGACGATGCTGACAGGGCAGAAGCGGCTCGTGAATCCGCTGAGCAAGCACAATCGATAGTTGATGGGCAGGCAAGTGAAGTCGACCGACTTCATACAGCGGTGGGGCAATTAGCGGCTGCTGCTGCCGGTAGTTCGACCAGTGCAGCACAATCCGCCAGTGAAAGCGAGAATAGCAAGAATGCCGCTGCTCAGAGTAAGGAAACTGCTGTGTCCGCCGCCTCGGCAGCGGGAAATTCAGCAACAGCTGCTGCGGGTGATAAAACTGCAGCTAAGGGGTTTCGGGATGAAGCCGAAGAGTTCGCCGTGCAAGCGAAAGCCTCAGCAGAAAGCATTGATGTCTCTGTTCTTGAAGAACAAATCAATCAGAAAGTCAGCCAGACGGTATTTGATGAAGCCATTGGAGGCAAGGCCAGCACCCAGCAACTGGCCGATGGTCTTGCCAATAAACTCACAATACAATCCACATTCTTATCTACAGATTTAAACTTGGCAATAACGTCAGGTATTTATCACCCAACCGCTGCGGCCCTCAACTTACCCTTGCAGGCTCTTGGAGTCATGGAAGTTTATGTTCGCCAAGGTGGTACCAGTCTTGTGCAGATATTCCATGCGACTGTGATGACGGTTGGTAATACGAATAGACATTTTGTAAGAATCGGGACTTTATCTGGCGGAGTGTGGTCATTCTCGACATGGGCTGAGCAGTATACGTCTCTTACAATGGCTCAGCTAGGAATTGGGCTACCAAATCAGTCGGATATTGCAAATTTCGACTGGCAGAATTTCGCATTCACGTCAGGGGCTAATTACGTCACAAATTACAACACGTGGGTAAACCCACCGGCTGGAGTGACTTATAACGCTGGTACTCGCGTTAGCATTCGAGTGACTTATATTTCTAATATCGCGGCTGGGCCTCGTATGGGATTGGAGTTAACACCAGACACAGGAGCGGCCACTAACTTCAAAGTTTACAGACTGCTATGTGTGGGTGCAGCAGGCTCCAGAGTGTTTACGTTCAATCAAGATTGGAACTCAGCAATCCCGGTGCCAATTACTGGCGGCGGGCATGGAGCAAATACATTAGCGGGCGCTCAATCGGCGCTTGGAGTAGTTGCCGATGCGTTTGGCGATAGCCAAGTGGCTAATACTCCGTGGATTGCTTTAACATTACAAAATGGGTGGACAACGACACCGCCAATAGGAAGAGCCGTATACAGAAAAGTAAATGGGATGCTGCAAATTGATATTATAAACGCCAGTGGGGGCGCAACAGCCGGAATGGTTACTATGTTCGCTTTGCCAGCTGGATATAGACCGACATTTAATAAGGCATATGTACTAATTGCCGCTTCTACCGGGGGTGGGGTTGGTAGCTTTCCCCAAAGGATAGGTATAGACACGCAAGGAATCGGGTCTATAGAAGCAGTAAACCCCGGATCACCGATATATTTAACAGTAAATATTCCATTACAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e9e4ddce8b4fa360828348360bc76efe4e2b539dda6b51f1bc3298ca598c9383
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7244
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of Yersinia phage vB_YenS-840 Hammerl,J.A. 2003-08 — GenBank