Protein

View in Explore
Genbank accession
BAW19413.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSDPNSLDPSLYYRITDLPPAAPITGAEVVEAVQDGKNVKFTLDQLFVAGKSAYQVAVEAGYVGTEAEWLASLDGKSAYDAAVALGFVGTEADWVASLKGDKGDKGDQGIQGIPGDQGIQGVKGDTGPSAYDIAVAGGFTGTEAEWSASLKGPKGDKGDTGAQGPIGNGARLLGAVADQSQLPDVTTSQEGDCYLIGPQFWAVTGGQWVNLGNLQGPEGKSAYELAQLAGFGGTEADWLASLHGADGIGLKVQGSFQSTSDLPAQNNSPGDAYIIDSVMWVWDATNWVPVGQVGPAGKSAYQLAKDAGLIPQSMTLSQWIASLQGKSSYQIAQANGFVGGQTAWLASLVGKSAFDVAVANGFTGSQTDWLATLIGPIGPVGPQGLKGDKGDMGPGVKILGTVPSSTDLPATSTDPGDMYIALDTLHGWAWTGTAFVDCGLVQGPKGDTGPQGLQGLQGLKGDTGTTGASAFDIAVAGGFTGTIDQWIASLQGTAGLTAYQVAVENGYVGDLNSWLNSLVGAKGDIGPQGPMGRGLAIKGVVADVPSLPANPAQEDAYIVGTDLYIFLGTDWTNAGPFRGAQGDQGIQGIQGIQGIKGDKGDQGIQGIQGDQGIQGPQGVQGPMGPGISIVGTLTDTSQLPATGTLGEGYLIGGHFWGWDGTQYTDMGVIQGPVGPQGLQGVKGDKGDTGAQGLQGIQGIQGIQGLKGDKGDKGDKGDTGNSIKVLGILPDQNSLPVSGTNNIGDAYRVGDHLFVWNGVSWLDAGQWKGDKGDQGIQGLQGVKGDTGAQGPQGDPGAAGAQGPQGDQGPMGPGVKILGTVNTSANLPATSTNPGDMYIAQDTLHGWAWTGTAFIDVGPIQGPQGVRGLQGIQGIQGAQGIQGVQGVKGDPGTRWIVLSRNPSAADGTVGDYFLNSASLQFFQKTSTVAWSALGYLGGGNVYDANFDDVLYARKDGNWIPVDVLEAPKDNGVYVRQNGAWSALTLTRQKTAAFDGPITQTTSIPMNWYPPADAHALAGIRLQLGTVATTDLVVNAVVHHADGTSDNISLTLAAGQTNMYVAETNSLPAGSNVSLQVVGSSGSDMLITLEYN
Physico‐chemical
properties
protein length:1089 AA
molecular weight: 111230,96590 Da
isoelectric point:4,30211
aromaticity:0,07346
hydropathy:-0,17291

Domains

Domains [InterPro]
DC_0385
STR
15–244
DC_0385 DC_1340 IPR008160 IPR008160 DC_0730 DC_2237
IPR050149
Unmapped
99–890
IPR050149 G3DSA:6.20.230.10
DC_0385
STR
242–310
DC_0385 G3DSA:1.20.5.320 DC_1340 G3DSA:1.20.5.320
DC_1340
STR
478–604
DC_1340 DC_1340
BAW19413.1
1 1089
Architecture
STR
STR
ATT
RBD
STR 15-310 | STR 317-959 | ATT 960-982 | RBD 983-1089
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RP31
[NCBI] 		1923890 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Ralstonia solanacearum
[NCBI] 		305 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BAW19413.1 [NCBI]
Genbank nucleotide accession
AP017925.1 [NCBI]
CDS location
range 147172 -> 150441
strand -
CDS
ATGAGCGATCCCAATTCTCTCGATCCCTCCTTGTATTATCGGATTACCGACCTGCCGCCTGCTGCACCGATCACTGGTGCAGAAGTGGTGGAGGCAGTCCAGGATGGTAAGAACGTCAAGTTCACTCTGGATCAACTGTTCGTAGCTGGTAAGAGCGCCTATCAGGTCGCTGTTGAAGCCGGCTACGTAGGCACCGAAGCTGAATGGCTGGCTTCTTTGGATGGCAAGAGCGCTTACGACGCTGCTGTCGCTCTCGGCTTTGTCGGTACTGAAGCAGACTGGGTCGCCAGCCTGAAGGGCGACAAGGGCGATAAAGGTGACCAAGGTATCCAAGGTATCCCGGGTGATCAGGGTATCCAAGGTGTCAAAGGCGATACTGGCCCATCGGCTTACGATATCGCTGTTGCCGGTGGCTTTACGGGTACTGAAGCTGAGTGGTCGGCGTCGCTCAAAGGCCCGAAAGGTGACAAAGGCGACACCGGAGCACAAGGTCCGATCGGTAACGGTGCTCGTTTGCTTGGTGCTGTGGCCGATCAATCTCAATTGCCTGACGTTACTACGTCGCAAGAAGGCGATTGCTATCTGATCGGGCCGCAATTCTGGGCTGTGACGGGCGGTCAGTGGGTGAATCTCGGCAACCTGCAAGGTCCCGAAGGCAAGAGTGCCTATGAACTGGCACAATTGGCTGGTTTTGGCGGTACGGAAGCCGATTGGCTGGCTTCTCTGCATGGCGCAGATGGTATCGGCCTGAAAGTTCAGGGTTCGTTCCAATCCACCAGCGATCTTCCGGCGCAGAACAACTCTCCGGGCGACGCGTATATCATCGACTCGGTGATGTGGGTGTGGGACGCTACGAACTGGGTTCCGGTGGGTCAGGTGGGTCCGGCAGGTAAGTCTGCTTACCAACTGGCCAAGGATGCTGGCCTGATCCCGCAATCGATGACGTTGTCGCAGTGGATCGCTTCGCTGCAAGGTAAGTCTTCGTACCAGATTGCGCAAGCGAATGGTTTCGTAGGCGGTCAGACTGCGTGGTTGGCTTCGCTGGTTGGTAAGTCTGCTTTTGATGTGGCAGTCGCCAATGGCTTTACCGGCTCGCAGACCGACTGGCTTGCTACTCTGATTGGACCGATTGGTCCCGTTGGTCCCCAAGGCCTGAAAGGCGACAAGGGCGATATGGGTCCGGGCGTCAAGATTCTTGGCACGGTTCCGAGCAGCACGGATCTCCCGGCAACCTCCACTGATCCGGGCGATATGTATATCGCCCTCGATACACTGCACGGCTGGGCGTGGACCGGCACCGCCTTCGTTGATTGCGGTTTGGTACAAGGTCCGAAAGGTGATACTGGACCTCAAGGTCTGCAGGGTCTGCAGGGCTTGAAAGGCGATACCGGCACCACCGGTGCTTCTGCCTTTGATATTGCCGTCGCTGGTGGTTTCACTGGTACTATTGACCAGTGGATCGCTTCGCTGCAAGGCACGGCTGGCCTTACGGCTTACCAAGTGGCTGTTGAAAATGGCTACGTAGGTGACCTGAATTCTTGGCTGAATTCGCTGGTCGGTGCTAAGGGCGATATCGGTCCTCAGGGTCCGATGGGGCGTGGTTTGGCGATCAAAGGTGTCGTGGCGGACGTTCCGTCACTACCTGCCAATCCCGCGCAGGAAGACGCTTACATTGTAGGCACCGACCTTTATATCTTCCTCGGCACTGATTGGACGAACGCTGGTCCGTTCCGTGGTGCTCAAGGGGACCAAGGTATCCAGGGTATTCAAGGTATCCAGGGTATTAAAGGTGACAAAGGCGATCAGGGTATCCAGGGTATTCAAGGGGACCAAGGTATCCAGGGTCCGCAGGGTGTGCAGGGTCCGATGGGTCCCGGCATCAGTATCGTTGGCACACTCACAGATACCTCGCAACTGCCGGCTACCGGTACGCTGGGTGAGGGTTATTTGATTGGCGGCCACTTCTGGGGCTGGGATGGTACACAGTACACGGACATGGGTGTCATTCAAGGTCCGGTAGGTCCTCAGGGTTTACAGGGTGTCAAAGGCGATAAAGGCGACACTGGTGCACAAGGTCTACAAGGTATCCAAGGTATTCAGGGTATCCAGGGCCTGAAGGGCGATAAAGGTGACAAAGGTGATAAGGGCGATACCGGTAACAGCATCAAGGTGCTTGGTATTCTGCCTGACCAAAATTCCCTGCCTGTCAGCGGCACCAACAACATCGGCGATGCTTATCGCGTAGGCGATCATCTCTTCGTGTGGAACGGTGTCAGCTGGCTTGATGCCGGGCAGTGGAAGGGTGACAAGGGTGACCAAGGTATCCAAGGCCTGCAGGGCGTAAAGGGCGATACTGGTGCTCAGGGACCACAAGGCGATCCTGGCGCAGCTGGTGCTCAGGGTCCGCAAGGTGACCAAGGTCCGATGGGTCCTGGTGTAAAAATCTTGGGTACGGTTAATACCAGTGCTAACCTGCCTGCTACCTCCACCAATCCTGGCGATATGTACATTGCTCAGGACACTCTGCATGGTTGGGCATGGACAGGTACAGCATTCATCGATGTTGGTCCGATCCAAGGCCCGCAGGGTGTGCGTGGCTTGCAGGGTATTCAAGGTATTCAAGGCGCTCAGGGTATTCAGGGCGTACAAGGTGTCAAGGGTGATCCGGGCACTCGCTGGATCGTACTGTCCCGCAACCCATCGGCTGCCGACGGCACTGTAGGGGATTACTTCCTCAACTCGGCATCGCTGCAGTTCTTCCAGAAAACCTCTACGGTGGCCTGGAGCGCGTTGGGTTACCTTGGTGGTGGTAACGTCTACGATGCCAACTTTGACGACGTGCTCTACGCTCGCAAGGATGGTAACTGGATTCCGGTAGATGTTCTGGAGGCACCGAAGGACAACGGTGTTTACGTTCGTCAGAATGGTGCTTGGTCTGCGCTGACGCTCACCCGTCAGAAGACCGCTGCCTTCGATGGTCCGATCACTCAGACCACTTCGATTCCGATGAATTGGTATCCGCCTGCAGATGCCCATGCCTTGGCTGGTATCCGGCTGCAGCTGGGTACGGTAGCTACCACTGACCTCGTGGTGAATGCCGTTGTCCATCATGCCGACGGTACGAGCGATAATATCTCGCTCACACTGGCAGCCGGTCAAACCAACATGTATGTGGCTGAAACTAACAGTCTCCCTGCCGGAAGCAATGTTTCCCTCCAAGTAGTGGGTAGCAGCGGTTCCGACATGTTGATTACTTTGGAGTACAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
33070da5f46c329c0d05a80f276c13d9742c9d04fb306269e86c1b99b8dd2898
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6701
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of two jumbo phages RP12 and RP31 infecting the phytopathogen Ralstonia solanacearum Kawasaki,T., Yoshikawa,G., Ogata,H. and Yamada,T. 2020 — GenBank