Protein

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Genbank accession
YP_009852049.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MALKTKIIVQQILNIDDITTTASKYPKYTVVLGTSISSITASELTAAVEASAASAAAAKDSEIAAKESETNAKDSENLSANYANSSEASATQSATSATEAERQAGLSKDSADASATSAEESKGFRDSAELAAQDAEQSRLLAEQAKKDAEAAKTAAATSEQNAAVSATESTNQATAATGSATKAGEYATTAKDSEIAAKTSELNAKDSEHESAISAEASEASASQSAISATQSAASATKSAESSAAAKTSETNAKTSETNAKTSETNAKTSETNAKTSETNAAAYAAAAKTSETNAAASAASASDSKGFRDEAEAFAAQASTSALAAKNSEINTKTSEINSKASEDAAKLAQQGALGSANTATQAMTTTKGYRDEAEGFKNTATTAATTATDKALEAAGSATMAGEKAIAATNAADRAEIAAASAEQVTQASLKKDQNLKDLTDKVAARKELQIQAVVSKDSNNVGDYNSFTSPNVVYELRLANDGGWRVARNSDNATSALPIGAGGTGAENVEGAKINFGIDRLKQTETETMMYAPGINSPYRITIRPDAAWGVWTDETGRWIPLSIDAGGTGSNTEVGARKNLNTPVGGQAIAIPDNSNILGFMSTYAESGYYSSGKLVTYQPPEASGWWMYELHVHRKNANGHVEYGNIVATTMNGNKWGIICTNGSWGEWYRIARSDRQLMLLSPDAQSALGDYSIAIGDNDSGLKWDSDGHISAFADSARIFAWTPSGINTYGTISSYVGDNRRGMYVNGTRRGDPNALIAGQVEGGTFSAWRSRASGLLVEHTSFDSAVNVFKSVYWGKDWISGMDSVKWSSGSAEVHLYVGGTDYIFDAAGNGSASNWVSRSDIRLKAHLKEIETASDKIDYLTGYTYYKRNNLIEDENSVYSIEAGLIAQDVERVLPEAVHSLNSDGKLDPKGEAIKGINYNGVVALLVNAFKEQKVKIDNQQEEINALRNELYELKNLVKSMLNGNAPTITELP
Physico‐chemical
properties
protein length:983 AA
molecular weight: 103232,59560 Da
isoelectric point:4,91375
aromaticity:0,06205
hydropathy:-0,46094

Domains

Domains [InterPro]
DC_0608
ATT
2–192
DC_0608 DC_0649 DC_1205 DC_0613
Coil
Unmapped
132–162
Coil DC_0415 IPR030392
IPR030392
CHP
849–909
IPR030392 Coil
YP_009852049.1
1 983
Architecture
ATT
ATT
STR
STR
RBD
ATT 2-192 | ATT 204-271 | STR 272-491 | STR 525-688 | RBD 689-983
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009852049.1
1 983
Domain Start End Length (AA) Confidence
N-terminal 1 514 514 0,7870
Central domain 515 754 241 0,4126
C-terminal 755 983 228 0,8286
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-514
Central
515-754
C-terminal
755-983

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage 2-3
[NCBI] 		2601697 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus ev23
Host Salmonella enterica subsp. enterica
[NCBI] 		59201 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009852049.1 [NCBI]
Genbank nucleotide accession
NC_048809.1 [NCBI]
CDS location
range 70874 -> 73825
strand -
CDS
ATGGCACTTAAAACTAAAATTATTGTACAGCAGATTCTGAACATAGATGACATTACAACTACTGCTAGTAAATATCCTAAGTACACAGTAGTTTTAGGTACTTCTATTAGTTCTATTACTGCTAGCGAACTAACAGCGGCTGTTGAGGCCTCTGCTGCTTCTGCTGCGGCAGCAAAAGATTCTGAAATTGCAGCAAAAGAATCTGAAACAAATGCTAAGGACTCTGAGAACCTATCTGCAAATTATGCTAACTCTTCAGAAGCTTCTGCAACTCAATCTGCTACTTCTGCTACTGAAGCGGAGAGACAAGCTGGTTTATCTAAAGATAGTGCTGATGCCTCTGCTACTTCAGCAGAAGAATCCAAGGGGTTCCGTGATTCTGCTGAACTTGCTGCACAAGATGCTGAACAGAGTCGTCTGCTAGCTGAACAAGCTAAGAAGGACGCTGAAGCTGCTAAGACTGCTGCTGCTACTTCTGAGCAAAATGCTGCTGTATCCGCTACTGAATCTACTAATCAGGCTACTGCTGCTACTGGTTCTGCTACAAAGGCGGGAGAATACGCTACTACTGCAAAAGATTCCGAGATAGCGGCTAAGACTTCAGAACTTAATGCTAAGGATTCTGAGCATGAATCTGCTATTTCTGCTGAAGCTTCTGAAGCTTCTGCTTCTCAATCTGCTATTTCTGCTACTCAATCTGCTGCGTCCGCTACTAAATCTGCAGAATCATCAGCTGCAGCAAAAACTAGTGAAACTAATGCAAAAACTAGTGAGACTAACGCAAAAACTAGTGAAACTAATGCAAAAACTAGTGAGACTAACGCAAAAACTAGTGAGACTAATGCAGCAGCATATGCAGCAGCAGCAAAAACTAGCGAGACTAATGCTGCTGCTTCCGCTGCCTCTGCTTCTGACTCCAAAGGATTCAGGGATGAAGCAGAAGCATTCGCTGCACAAGCCTCCACATCAGCATTAGCAGCAAAAAACTCAGAAATTAATACAAAGACTAGCGAAATTAACTCAAAAGCTAGTGAAGACGCTGCTAAGCTAGCTCAGCAAGGTGCATTAGGTAGTGCGAATACAGCTACGCAAGCGATGACCACAACCAAAGGCTACAGAGACGAAGCAGAGGGATTTAAAAATACCGCCACTACTGCTGCAACGACAGCAACAGACAAGGCCCTGGAGGCTGCTGGTAGTGCTACAATGGCAGGAGAGAAAGCAATTGCAGCTACCAATGCAGCTGACAGAGCGGAAATAGCAGCTGCATCGGCAGAACAGGTTACGCAAGCGTCGTTGAAGAAGGATCAGAACCTTAAAGACCTTACTGATAAAGTTGCTGCAAGGAAGGAACTTCAAATTCAAGCGGTAGTGAGCAAGGACTCTAATAATGTGGGTGATTATAACTCATTCACCAGCCCCAATGTAGTATATGAACTTAGACTGGCTAATGATGGCGGTTGGCGTGTTGCAAGAAATAGTGATAATGCTACATCGGCTCTTCCTATTGGTGCTGGCGGTACTGGTGCGGAAAACGTTGAGGGCGCAAAAATAAACTTTGGCATTGATCGTTTAAAGCAAACAGAAACAGAAACTATGATGTACGCACCAGGGATTAACTCACCTTATCGAATCACAATTAGACCTGATGCGGCGTGGGGTGTTTGGACTGATGAAACTGGAAGATGGATTCCTCTTTCAATTGATGCTGGCGGCACTGGATCTAATACTGAAGTTGGCGCAAGAAAGAACTTAAACACTCCTGTTGGTGGTCAAGCAATTGCCATCCCGGATAATTCAAACATTCTTGGGTTTATGTCAACATACGCAGAAAGCGGTTATTACTCAAGCGGAAAACTTGTTACATATCAACCACCTGAAGCCTCTGGTTGGTGGATGTATGAATTGCATGTTCACCGTAAAAATGCAAACGGCCATGTTGAGTATGGAAATATTGTTGCAACCACAATGAACGGCAATAAATGGGGTATCATTTGCACTAATGGCTCTTGGGGTGAATGGTACAGGATAGCAAGATCTGATAGGCAATTGATGTTATTAAGTCCTGATGCTCAATCAGCTCTTGGTGATTACTCTATAGCAATTGGTGATAATGACTCTGGTTTGAAATGGGATAGTGATGGTCACATAAGCGCGTTTGCTGATTCAGCGAGAATATTTGCATGGACTCCATCAGGTATAAATACTTACGGGACCATATCCTCTTATGTTGGGGATAATAGAAGGGGCATGTATGTAAATGGGACTAGGCGTGGAGATCCAAACGCGCTTATTGCTGGTCAAGTTGAGGGTGGTACTTTTAGTGCGTGGCGTAGTCGTGCGTCTGGTTTGTTGGTAGAGCATACTAGTTTTGATTCGGCTGTCAACGTATTTAAATCTGTTTATTGGGGTAAGGATTGGATATCGGGAATGGATTCTGTTAAATGGTCCTCTGGAAGTGCTGAGGTTCATCTTTATGTTGGTGGAACTGATTATATTTTTGATGCCGCTGGTAATGGTAGCGCCTCAAACTGGGTTAGTAGATCTGATATTAGATTGAAAGCGCATTTAAAAGAAATTGAAACCGCATCTGACAAAATTGATTATCTAACTGGTTATACTTACTACAAACGCAATAATCTAATTGAAGATGAAAACAGCGTTTATAGTATTGAGGCTGGATTGATTGCTCAAGATGTTGAAAGGGTTTTGCCTGAAGCGGTTCATTCTTTGAATAGTGATGGTAAGCTAGATCCAAAAGGTGAGGCAATCAAAGGTATTAACTATAATGGTGTTGTCGCACTTCTTGTTAACGCATTCAAAGAGCAAAAAGTAAAGATTGATAATCAACAGGAGGAAATTAACGCATTACGCAATGAGTTATATGAACTGAAAAACCTTGTAAAATCAATGCTTAACGGAAATGCTCCAACAATTACAGAACTACCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
563ed3c08ec3d3fcbcf3a319b0e89cdeac75ce4a9eb07359d7cffb413546c46d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5867
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50