Protein

View in Explore
Genbank accession
XCP73629.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MFELLLSAAGQAKPVEMIPYNQPTLFGQLDVGLVGSVPYFRNGLLNINSGAPSRSTTDNNIRIFDSTGTQISKTAVQNSYSLCHTAGVFVPTSDRLYMFGGRRGASWTQNVITMINPTVPNDNLISNQLMNTSTYNSIGDWDGGEFIWVLEHATDLLIRYRLSNNVREVMSARCPVILSGAYAFCHKGNFYVMGGWKNISGSWVVNQDVYKYTVAINTWTLYHSYSTDYHGGHQGGKYWNGTFNYTIVKDGKIHCVRYYIAEKQFVVTETNIGEVHGTSVALNPSNGDLYLIGGSDIVIDDALFNTPERTKAAIYKFTIPIPPSKTEWEVMANAPYDSRGSTAVVIDDELYMFGGYTSTGAYRGAFNKYNPETNTWNGLFTGSGLSPSARANMCAAANDTHMYLFSGSNQSADFWRYNVATNDWTAITPASPGSSNPVFRTQATMVHYNGKLYLLGGNNESDALFVYDIASNMWSKRVAQGGIQRSSHRAVVVGEYMYVYGGFVNGSQSGRFDRMNMNTFAWESLPTTDGPGVNSYGVMLTNDEEIIYIGGADEDKRRKANAYNIQSRTWRKLPELPNGVNDGYGGFINGTAYVGGGLTGANNNTITDKFYRLGI
Physico‐chemical
properties
protein length:615 AA
molecular weight: 67825,93950 Da
isoelectric point:6,27448
aromaticity:0,12520
hydropathy:-0,30455

Domains

Domains [InterPro]
IPR011043
STR
36–296
IPR011043 IPR015915
IPR015915
STR
39–242
IPR015915 IPR015915 IPR015915
PF24681
STR
269–457
PF24681 IPR006652
PTHR24412
Unmapped
286–475
PTHR24412
XCP73629.1
1 615
Architecture
STR
STR 36-614 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCP73629.1
1 615
Domain Start End Length (AA) Confidence
N-terminal 1 18 18 0,8109
Central domain 19 224 207 0,4246
C-terminal 225 615 390 0,3986
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-18
Central
19-224
C-terminal
225-615

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage HPP-Temi
[NCBI] 		3234043 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCP73629.1 [NCBI]
Genbank nucleotide accession
PP968062 [NCBI]
CDS location
range 11443 -> 13290
strand +
CDS
ATGTTTGAATTATTGTTATCAGCTGCTGGGCAAGCTAAGCCAGTGGAAATGATACCGTATAACCAACCAACATTGTTTGGACAACTGGATGTTGGATTGGTTGGATCGGTACCCTATTTCAGAAATGGTTTATTAAATATTAATAGTGGTGCCCCATCAAGAAGTACAACTGATAATAACATCAGAATTTTTGATAGCACTGGTACTCAAATCAGTAAAACAGCTGTCCAAAATAGTTATTCACTTTGTCATACGGCGGGTGTATTTGTTCCAACATCCGATAGACTTTACATGTTCGGTGGGCGTCGTGGCGCTTCTTGGACACAAAACGTCATCACGATGATCAATCCAACTGTACCTAATGATAATCTTATTAGTAATCAGTTGATGAATACATCCACTTATAACAGTATCGGCGATTGGGATGGCGGTGAATTTATTTGGGTACTGGAACATGCAACAGATCTTTTGATTCGCTATAGACTATCGAATAACGTTCGAGAAGTAATGAGTGCCCGGTGCCCTGTTATTCTATCTGGAGCGTATGCATTCTGCCATAAAGGGAATTTCTATGTGATGGGTGGATGGAAGAACATCTCTGGCAGTTGGGTTGTTAACCAAGATGTTTATAAATACACCGTTGCTATTAATACATGGACATTGTACCATTCATACTCCACAGACTACCACGGTGGTCATCAAGGTGGTAAGTACTGGAACGGGACTTTTAACTACACTATCGTTAAAGATGGTAAGATTCATTGTGTTCGTTATTATATCGCCGAAAAACAATTTGTTGTTACTGAGACGAATATTGGTGAGGTCCATGGGACATCAGTCGCATTAAATCCATCGAATGGCGATCTGTATCTGATCGGTGGTTCGGACATTGTTATCGATGACGCCCTTTTTAACACCCCTGAAAGAACGAAAGCAGCTATCTATAAATTCACTATTCCTATCCCTCCAAGTAAAACTGAATGGGAAGTAATGGCAAACGCACCTTATGATAGTCGAGGTTCCACTGCGGTTGTAATAGATGATGAACTGTATATGTTCGGCGGGTATACAAGTACAGGTGCATATAGAGGCGCGTTTAATAAATATAATCCTGAGACTAATACATGGAACGGTCTATTCACTGGATCTGGTTTAAGTCCGAGTGCCCGTGCTAATATGTGTGCAGCTGCAAATGATACACATATGTACCTATTCAGTGGATCTAACCAATCAGCAGATTTCTGGCGTTATAACGTAGCGACCAATGATTGGACGGCTATTACACCCGCTTCTCCGGGTTCATCTAATCCAGTATTTAGAACACAAGCTACGATGGTTCATTATAATGGTAAGCTCTATTTGCTTGGTGGGAATAATGAATCTGACGCGTTGTTCGTCTACGATATTGCATCTAACATGTGGTCAAAACGAGTTGCGCAAGGTGGCATCCAACGATCTTCACATAGAGCGGTTGTTGTCGGCGAGTACATGTATGTCTATGGTGGATTTGTAAATGGTTCGCAATCCGGTCGATTTGATCGAATGAATATGAATACATTTGCATGGGAGTCTCTACCGACTACCGATGGTCCCGGTGTTAACAGTTACGGTGTAATGCTGACTAACGATGAAGAAATTATATACATTGGCGGCGCTGACGAAGACAAACGTAGAAAAGCCAATGCGTATAATATCCAATCGAGAACTTGGCGTAAACTACCAGAACTACCAAACGGTGTGAATGATGGCTATGGTGGATTTATTAATGGCACAGCATATGTTGGCGGTGGTCTAACTGGAGCCAATAATAATACAATTACAGACAAGTTCTATCGTCTTGGAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ffbb04568e383bb0bbf71267e085758736f78f4bc0a5c8c518dea12c1d1a404f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8914
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of Pseudomonas phage HPP-Temi Olorundare,O.O., Agu,C.G., Kabantiyok,D., Ogundeji,A., Dung,T., Zrelovs,N., Svanberga,K., Jansons,J., Kazaks,A., Morenikeji,R.O. and Pewan,B.S. 2024-10-25 — GenBank