Protein

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UniProt accession
A0A8S5QDZ7 [UniProt]
Protein name
Nucleoid-associated protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,79
Protein sequence
MSSRLPITGRLIRDWCRRSCGSSSGADRIRLTGVFRKCKNMATDNDVIKKELEGIRDERRTHANTAQRIGNALLSLLGRVENAGGNFLRKDVADTAHKMIRFMEGLKLGEGEMGLDAKGGAVLSDVVVDRVHDARSTPAERVIVGAQGFDLYMGEDGKSHLYVDYLVTRIKAFFAQLEVRKVSYSGGTTIFSNAGSTIAKVTYVFDAAGTTVVAYKCYALADDGTTRTANWWHVGMMALCQTFNVKAGVGDGLKNRYYWRMVIGVGQETLEDGKLYDYVILSNVREFEGGEAMLPSRGVRVLADETGRVLRWGGVAVATVYDGELVSMAKLYEQQEGRTTDDGGNVIAQRMFYGYEAVNGGEPDAPAEGDVIVQVGDQIRWKSRGNVIKLSTSTEENATDSAPAITMYHQIGALWETDANDSAGEPVRNPYQWMEVTCVISPELVLMNADRFKLFTRSPKNIIEPYVVMYSIVPSSSCIVRHTATRSTTPEVIEAETVKRVGNTVEMLNNSDVKYTAEVVWQDGSVETLSLADVHTRGLYNVKSLKIKAYTLKDAEKMLAECDIAVVTDGEQGEDGKPGADGKPGADGADGWDGKDAAVVVINPSVLTVDTVKDGSGNPRVDCSGEKVKADVRIEREGVSIVSECDRYEVVDKMGCTAHIADGGTSRMRIVIDSITRDEYMVGSTKRYIPRTTATATVRIHCSTNNSYYYATLTVNVNVSAVWSELTITSESLSSKYSEISSSVDGMRKELTQYDSKIEQTARNIALKVSQTAVGRRNMLVGSALRRQGEGVRIGTQEGGGIEMLNGIGGVNCAHVTATSPDHYSGLFYWGVTPDLTKCIKIEKNKTYTASCWMKCDRIDVIARIEICWAAKATGAPRTGYGFSDTFKINKANEWQFCSFTFNTGNTTYDFIECNFWVNNKTEGVTTNAWFCQPMLVEGDGIGWSMSPEDFEYIGGNLLDNTDTLVQGGNLTVRDGSYSALHPRDNSDDYINRQSYKGFPTLNTDISAATNVNSIDMLEWGLGADVVKQGQDYMLSFMAKGNKGGQFTAYFYKSDTTEKVFVEVLDRVNGPNQHTAANGNAQVEFKEDYVWKRYWVHWRVVGSNVPGRVLIRCLKGTDLYVSQPKLEYGATMTEYRATKTGYVEDKSVAGKLLEAGIDIDSKQITMTADNTRFRTRSGQEVAVFDENGLNASLVKAQRLETEGAEAAVKIEGGMIAVLGRAGVPNIKFGVNSDGYAVMQYFDNAGNMLYDLGPAGLAKISMQKASMTFTEWIDVRGANLAAPYIKKKTYTSSKGSYSLDFDIADTEANDRLLFGKYAQPGTLVSKNLDFTQLTHLYLYSAPRVDGAIVSDDDSRRGLGNLDLTKAADGVYFTKEWPLAENGKLTNVATGPYIPADAKIKDNMQSNILLLDGTEVMMMPRCYFSGWMEQKKLTAYLKPVITRLEIFSWQEMQISANSGLTPPIQQ
Physico‐chemical
properties
protein length:1464 AA
molecular weight: 160995,92690 Da
isoelectric point:5,54433
aromaticity:0,08675
hydropathy:-0,30888

Domains

Domains [InterPro]
DC_0204
STR
18–1061
DC_0204
Coil
Unmapped
744–764
Coil G3DSA:2.60.120.260 DC_0274
A0A8S5QDZ7
1 1464
Architecture
STR
STR 18-1407 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5QDZ7
1 1464
Domain Start End Length (AA) Confidence
N-terminal 1 185 185 0,9335
Central domain 186 777 593 0,6418
C-terminal 778 1464 686 0,0311
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-185
Central
186-777
C-terminal
778-1464

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctEIp38
[NCBI] 		2825394 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAE17296.1 [NCBI]
Genbank nucleotide accession
BK015638 [NCBI]
CDS location
range 15495 -> 19889
strand +
CDS
ATGAGTTCGAGGCTGCCTATTACGGGCAGACTTATCAGGGACTGGTGTCGTCGTTCTTGTGGCAGCTCTTCGGGGGCGGACAGAATACGATTGACAGGAGTGTTTCGCAAATGTAAAAATATGGCTACAGATAATGATGTTATAAAAAAAGAGCTTGAGGGCATCCGCGACGAGCGCCGCACTCATGCCAATACGGCTCAGCGCATAGGCAATGCTTTGCTCTCTCTGCTAGGTAGGGTAGAGAATGCCGGCGGCAACTTTCTGCGCAAGGATGTCGCAGACACTGCACATAAGATGATACGCTTTATGGAGGGGCTGAAGCTGGGCGAGGGCGAGATGGGGCTTGACGCTAAGGGCGGGGCTGTGCTGAGCGACGTTGTGGTAGACCGTGTGCATGACGCCCGGTCTACTCCGGCTGAGAGAGTGATTGTCGGGGCGCAGGGCTTCGACCTGTATATGGGCGAGGATGGCAAGAGCCACCTGTACGTTGACTATCTTGTGACTCGCATCAAGGCGTTTTTTGCGCAGCTGGAGGTGCGCAAGGTGTCGTATTCGGGGGGCACGACCATCTTCTCGAACGCCGGCTCGACGATTGCCAAGGTGACTTATGTGTTTGACGCTGCGGGAACGACGGTGGTGGCGTACAAGTGTTATGCTCTGGCTGACGACGGCACGACGAGGACTGCGAACTGGTGGCATGTGGGCATGATGGCTCTGTGCCAGACGTTCAACGTGAAGGCGGGTGTGGGCGACGGTCTGAAGAACAGATACTACTGGCGCATGGTGATTGGTGTGGGTCAGGAGACGCTGGAAGACGGCAAGCTGTATGACTATGTGATACTGTCGAACGTGAGGGAGTTTGAGGGTGGCGAGGCGATGCTGCCGAGCCGCGGCGTGAGGGTGCTGGCTGACGAGACGGGCAGGGTGCTGCGCTGGGGCGGTGTGGCTGTGGCTACGGTGTATGACGGCGAGCTGGTGTCGATGGCCAAGCTGTATGAGCAGCAGGAGGGCAGGACTACTGACGACGGGGGCAACGTGATTGCGCAGAGGATGTTCTACGGTTATGAGGCTGTGAACGGCGGCGAGCCGGATGCTCCTGCCGAGGGGGATGTGATTGTGCAGGTGGGCGACCAGATAAGATGGAAGAGCCGTGGCAATGTAATCAAGCTGTCGACTTCGACTGAGGAAAATGCTACGGACTCGGCTCCTGCTATCACGATGTATCACCAGATTGGCGCGCTGTGGGAGACTGACGCTAATGACAGCGCGGGGGAGCCGGTCAGGAATCCGTACCAGTGGATGGAGGTGACGTGTGTGATATCGCCGGAGCTGGTGCTGATGAATGCTGATAGGTTCAAATTGTTTACGCGCAGTCCGAAGAACATTATTGAGCCTTATGTGGTGATGTACAGTATCGTGCCGAGCAGCTCGTGCATTGTGAGGCATACGGCTACACGGTCGACGACTCCGGAGGTTATCGAGGCTGAGACGGTGAAGCGTGTCGGCAACACTGTCGAGATGCTGAATAACAGCGACGTGAAGTATACGGCTGAGGTGGTGTGGCAGGACGGCAGCGTGGAGACGTTGAGTCTGGCTGATGTGCACACGAGGGGTCTGTACAACGTGAAGTCGCTGAAGATCAAGGCTTATACGCTCAAGGATGCGGAGAAGATGCTGGCGGAGTGTGACATTGCTGTGGTTACTGACGGTGAGCAGGGCGAGGATGGCAAGCCTGGTGCTGACGGCAAGCCTGGTGCTGATGGTGCTGACGGCTGGGACGGCAAGGATGCTGCCGTGGTGGTGATTAATCCGTCGGTGCTGACGGTGGACACGGTGAAGGACGGTAGCGGCAACCCTCGTGTTGACTGCTCGGGCGAGAAGGTGAAGGCTGATGTGAGGATTGAGCGTGAGGGTGTGTCTATAGTCAGCGAGTGTGACCGCTACGAGGTTGTTGACAAGATGGGCTGTACGGCGCATATCGCTGACGGGGGCACGTCGAGAATGCGCATTGTGATTGACTCTATAACGCGCGACGAGTATATGGTGGGCAGCACTAAGCGGTATATCCCACGCACTACGGCTACGGCTACGGTGAGGATTCATTGCTCTACTAACAATAGCTATTATTACGCTACGCTGACGGTGAATGTGAATGTGTCGGCGGTGTGGAGCGAGCTGACTATCACGTCGGAGAGTCTGTCGTCGAAGTATTCGGAGATTAGCAGCAGTGTCGACGGCATGCGTAAGGAGCTGACGCAGTATGACTCGAAGATTGAGCAGACGGCACGTAATATTGCGCTGAAGGTGTCGCAGACGGCTGTGGGCAGGAGAAACATGCTGGTGGGGAGTGCGCTGAGAAGGCAGGGTGAAGGAGTGAGAATTGGCACCCAAGAAGGTGGCGGTATTGAGATGCTGAACGGGATTGGCGGGGTGAATTGTGCTCATGTGACAGCAACATCTCCTGACCATTATTCTGGTCTGTTTTATTGGGGAGTCACCCCAGACCTTACAAAGTGCATCAAAATAGAGAAGAACAAGACTTATACGGCATCTTGTTGGATGAAATGTGACAGAATTGATGTTATCGCTCGCATTGAAATATGTTGGGCAGCAAAGGCTACGGGTGCGCCTCGCACGGGTTATGGATTTTCTGACACATTCAAAATCAATAAAGCAAATGAGTGGCAGTTTTGTTCATTCACCTTTAATACTGGTAATACGACATACGACTTCATCGAGTGTAATTTTTGGGTTAACAACAAGACGGAAGGAGTTACTACTAATGCCTGGTTTTGTCAACCTATGTTGGTCGAGGGCGACGGCATCGGCTGGTCTATGTCGCCAGAGGACTTTGAGTATATCGGGGGCAATCTGCTGGATAATACTGATACGCTGGTGCAAGGCGGCAACTTGACGGTAAGAGACGGCAGCTATAGTGCTCTGCATCCTCGTGACAACAGTGACGATTATATTAACAGACAGTCATATAAGGGGTTCCCGACGCTGAATACTGACATTAGTGCAGCAACTAATGTCAATAGTATTGATATGCTGGAATGGGGATTAGGCGCTGATGTGGTAAAGCAGGGCCAAGACTATATGCTCTCGTTTATGGCGAAGGGCAACAAGGGTGGTCAGTTTACTGCTTACTTCTACAAAAGCGACACTACAGAGAAGGTGTTCGTCGAGGTGCTGGACAGAGTGAACGGCCCTAACCAGCACACGGCAGCCAACGGCAATGCGCAGGTGGAGTTTAAGGAAGACTATGTATGGAAACGTTATTGGGTGCACTGGCGTGTTGTTGGCAGTAATGTTCCTGGCAGAGTGTTGATACGCTGCCTGAAAGGCACTGACCTATATGTCTCTCAGCCTAAGCTGGAGTATGGCGCTACGATGACTGAGTATCGTGCGACGAAGACTGGCTACGTTGAGGACAAGAGCGTGGCTGGCAAGCTGCTTGAAGCTGGCATCGACATTGACAGCAAGCAGATTACGATGACGGCGGATAATACCAGGTTCCGCACCCGTTCGGGGCAGGAGGTGGCTGTGTTTGACGAGAACGGATTGAACGCCTCGCTGGTAAAGGCGCAACGGCTTGAAACGGAGGGCGCAGAAGCGGCTGTGAAAATCGAGGGCGGCATGATTGCGGTGCTCGGTCGTGCCGGTGTGCCTAACATCAAATTTGGTGTAAATAGCGACGGATATGCTGTGATGCAATATTTTGACAATGCCGGCAATATGCTGTATGACTTAGGCCCTGCGGGTCTGGCAAAAATAAGCATGCAGAAAGCATCAATGACATTCACAGAGTGGATAGATGTGAGGGGAGCTAATTTGGCAGCACCGTATATTAAGAAAAAGACGTATACAAGCAGTAAAGGCTCATATAGTCTTGATTTTGATATTGCTGATACAGAGGCAAATGACAGATTGCTGTTTGGTAAATATGCTCAGCCGGGTACGTTGGTGTCAAAGAATTTGGACTTTACACAATTGACGCATCTGTATCTGTACAGTGCTCCACGTGTCGATGGCGCAATTGTTTCGGATGATGACTCACGTAGAGGTCTTGGTAATTTGGATTTGACAAAAGCTGCAGATGGTGTATATTTTACAAAGGAGTGGCCTCTTGCTGAGAATGGCAAACTTACAAATGTTGCTACTGGTCCGTATATACCTGCTGATGCTAAAATCAAGGATAATATGCAAAGTAATATCTTGCTGCTTGATGGTACAGAGGTAATGATGATGCCACGCTGCTACTTTAGCGGTTGGATGGAACAGAAAAAGCTGACTGCATACTTGAAGCCGGTCATTACAAGACTTGAAATATTCAGTTGGCAGGAAATGCAGATTAGTGCAAATAGCGGATTGACGCCACCTATACAGCAGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
d5885069dfe4516c319a6981361b9dec1fe86121bd5d74b66519ba777647218d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7492
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50