Protein

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Genbank accession
YP_009280720.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MALIRLVAPERVFSDLASMVAYPNFQVQDKIILLGSGGGDFTFTTTASVVDNGTVFAVPGGYLLRKFVGPAYSSWFSNWAGIVTFMSAPNRHLVVDTVLQATSVLNIKSNSTLEFTDTGRILPDAAVARQVLNIIGSAPSAFVPLAADAAAGSKVITVAAGALSVVKGTYLYLRSNKLCDGGPNTYGVKISQIRKVVGVSTSSGVTSIRLDKALHYNYYLSDAAEVGIPTMVENVTLVSPYINEFGYDDLNRFFTSGISANFAADLHIQDGVIIGNKRPGASDIEGRSAIKFNNCVDSTVKGTYFYNIGWYGVEVLGCSEDTEVHDIHAMDVRHAISLNWQSTADGDKWGEPIEFLGVNCEAYNTTQAGFDTHDIGKRVKFVRCVSYDSADDGFQARTNGVEYLNCRAYRAAFDGFASNTGVGFPIYRECLAYDNVRSGFNCSYGGGYVYDCEAHGSRNGVRTNGGCVKGGRYTRNSSSHIFVTKDVAETAQTSLEIDGVSMRYYGTGRAVYFHGTMGIDPTLVSMSNNDMTGHGLFWALLSGYTVQPTPPRMSKNLLDDTGIRGVATLVAGEATVNARVRGNFGSVANSFKWVSEVKLTRLTFPSSAGALTVTSVAQNQDVPTPNPDLNSFVIRSSNAADVSQVAWEVYL
Physico‐chemical
properties
protein length:651 AA
molecular weight: 70041,82120 Da
isoelectric point:5,91662
aromaticity:0,10445
hydropathy:-0,02320

Domains

Domains [InterPro]
IPR057094
ENZ
1–71
IPR057094 DC_0267 IPR012334 IPR056204
IPR057095
ENZ
142–230
IPR057095
DC_1484
STR
180–651
DC_1484
YP_009280720.1
1 651
Architecture
ENZ
ATT
STR
ENZ 1-71 | ATT 72-145 | STR 146-651
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009280720.1
1 651
Domain Start End Length (AA) Confidence
N-terminal 1 77 77 0,9847
Central domain 78 566 490 0,9943
C-terminal 567 651 84 0,9277
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-77
Central
78-566
C-terminal
567-651

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage KpV475
[NCBI] 		1852657 Uroviricota > Caudoviricetes > Autographivirales > Slopekvirinae > Drulisvirus
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009280720.1 [NCBI]
Genbank nucleotide accession
NC_031025.1 [NCBI]
CDS location
range 39896 -> 41851
strand +
CDS
ATGGCATTAATTAGATTAGTAGCTCCCGAGCGGGTGTTCTCCGACTTGGCGAGCATGGTAGCATATCCAAACTTTCAGGTGCAGGACAAGATTATCCTACTGGGCAGTGGTGGTGGGGATTTCACCTTTACTACTACTGCGTCGGTAGTGGATAACGGAACTGTGTTTGCTGTACCCGGTGGGTACCTGCTTCGTAAATTCGTGGGCCCAGCATACAGCTCCTGGTTCAGTAACTGGGCGGGCATAGTCACGTTCATGAGCGCGCCTAATAGGCACCTGGTTGTGGACACGGTCCTGCAGGCCACGAGTGTGCTCAACATCAAAAGCAACTCTACGCTAGAGTTTACCGATACCGGAAGAATCCTGCCGGATGCTGCGGTTGCGCGTCAGGTGCTTAATATTATCGGCTCGGCACCCTCGGCGTTCGTGCCGTTAGCAGCGGATGCCGCGGCGGGCAGCAAAGTCATTACGGTGGCTGCTGGGGCTTTGTCTGTGGTAAAAGGTACGTACTTGTATCTTCGCTCTAACAAGCTGTGTGACGGCGGGCCTAACACGTACGGGGTAAAGATTTCCCAGATTAGGAAAGTGGTAGGTGTTAGCACCTCCAGTGGCGTCACCAGTATTCGGCTGGATAAAGCGCTGCACTATAACTACTACCTATCTGATGCTGCGGAAGTAGGTATCCCGACAATGGTGGAGAACGTAACCTTAGTATCCCCGTACATCAATGAGTTCGGCTACGACGACTTGAACCGGTTCTTTACTAGCGGTATCTCTGCCAACTTTGCCGCGGACTTGCACATCCAGGACGGGGTTATTATTGGCAACAAACGCCCGGGGGCCTCTGACATAGAGGGACGTAGTGCTATTAAGTTCAACAATTGCGTAGACAGTACCGTTAAGGGTACGTACTTCTACAACATTGGATGGTACGGGGTAGAGGTGCTCGGCTGCTCCGAGGATACGGAAGTACACGATATCCACGCTATGGACGTACGCCACGCAATCTCTCTAAACTGGCAGAGTACTGCAGATGGGGACAAATGGGGAGAGCCTATCGAGTTCTTAGGCGTTAACTGCGAAGCCTACAACACAACCCAGGCTGGGTTTGATACTCACGACATTGGTAAGCGTGTGAAGTTCGTTCGCTGCGTTTCGTACGACAGTGCTGACGATGGTTTCCAGGCGCGTACTAACGGGGTAGAGTACTTGAATTGTCGAGCTTACCGTGCAGCCTTTGATGGGTTCGCCTCCAACACCGGTGTAGGCTTCCCTATCTATAGAGAGTGCTTAGCTTATGACAACGTACGCTCTGGCTTTAACTGTTCGTACGGTGGTGGCTACGTTTATGACTGTGAGGCTCACGGTAGCCGGAACGGTGTCCGCACCAACGGAGGTTGTGTTAAAGGCGGTAGGTACACTCGCAACTCCAGCTCTCACATCTTCGTCACTAAGGATGTAGCTGAGACAGCGCAGACGTCCCTGGAGATTGATGGCGTGAGCATGCGCTACTATGGTACCGGAAGAGCTGTGTACTTCCACGGCACTATGGGCATTGACCCTACCCTGGTATCTATGTCCAATAACGACATGACCGGTCACGGCCTGTTCTGGGCATTACTGAGCGGCTACACTGTTCAACCTACGCCTCCGCGCATGTCCAAGAACTTACTGGATGATACAGGTATCCGTGGAGTGGCAACGCTGGTTGCTGGTGAGGCTACTGTCAACGCCCGAGTACGTGGGAACTTTGGCAGCGTAGCTAACTCCTTCAAGTGGGTGTCTGAGGTTAAGTTGACGCGGTTGACCTTTCCCTCTAGTGCTGGGGCCTTGACGGTTACTAGCGTAGCACAGAACCAGGATGTGCCTACACCTAATCCGGACCTAAACAGCTTCGTGATTAGGAGCAGTAACGCAGCGGACGTATCCCAGGTAGCCTGGGAGGTGTATCTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
15b4208dbf396fc2b2b6caf20df675116c7307b991d70743a0e06881a501949a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8635
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic sequence and analysis of new Klebsiella pneumoniae bacteriophages Komisarova,E.V., Krasilnikova,V.M., Kislichkina,A.A., Myakinina,V.P. and Volozhantsev,N.V. 2017-09-14 — GenBank