Protein

Genbank accession
ADQ92407.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MSAKFYTLLTEIGAAKLASAAALGVPLKITHMAVGDGGGVLPTPSAQQTALVAEKRRAALNMLYIDPQNSSQIIAEQVIPETEGGWWIREVGLFDETGALIAVGNCPESYKPQLTEGSGRTQTVRMVLITSSTDNITLKIDTAVVLATRKYVDDKALELKVYVDDLMAKHLAAPDPHSQYAQKDSPTLTGIPKVPTPAAGNSTKQIANTEFVASSIAAIVDSAPAALDTLNELAAALGNDPNFATTMINALAGKQPLDNTLTNLSGKDVAGLLAYLGLGETINLATGAMQKDQNLNDVPDKALARQSLQLGNSATLNVGTTPDTVAAGDDIRISTAKRAIDDTQTGLGAQPVMWVSTADDLSILPSGARRFASNKAPATILPVNDYVFLEVIAKRDCVDGCAVLITDSVGNTWIGARWDATNDSGFTWRPLMSCPPGVPLPWPSDTIPAGYALMQGQAFDKNVYPLLAIAYPSGTIPDMRGWTIKGKPASGRAVLSQELDGNKSHSHSARAQDTDLGTKGTSSFDYGTKSSNTTGGHNHSAGGTYGGDSIGGKIRVQHDGNDQLTSWNGDHAHTTWIGPHDHTVYIGPHGHVVIVDADGNEETTVKNIAFNYIVRLA
Physico‐chemical
properties
protein length:617 AA
molecular weight: 65025,33500 Da
isoelectric point:5,30913
aromaticity:0,05673
hydropathy:-0,16645

Domains

Domains [InterPro]
IPR022225
1–150
IPR022225 SSF88874
IPR051934
1–617
IPR051934
IPR037053
432–485
IPR037053
IPR011083
437–484
IPR011083
ADQ92407.1
1 617
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage RE2010
[NCBI] 		929814 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Enteritidis str. LK5
[NCBI] 		272989 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADQ92407.1 [NCBI]
Genbank nucleotide accession
HM770079.1 [NCBI]
CDS location
range 23476 -> 25329
strand +
CDS
ATGAGCGCAAAATTTTATACCCTGCTGACGGAGATCGGCGCGGCGAAACTGGCAAGCGCCGCCGCGCTCGGTGTCCCGCTGAAAATTACCCATATGGCGGTGGGCGACGGTGGCGGTGTGCTGCCCACACCCAGCGCGCAACAGACCGCGTTAGTTGCTGAGAAGCGTCGAGCAGCGCTGAATATGCTGTATATCGACCCGCAGAACAGCAGCCAGATTATTGCTGAGCAAGTGATCCCGGAAACTGAGGGGGGATGGTGGATTCGTGAGGTCGGCCTGTTTGATGAAACCGGCGCACTGATCGCCGTGGGTAACTGCCCTGAGAGCTACAAGCCGCAGCTGACAGAAGGGAGCGGACGTACGCAGACCGTGCGCATGGTACTGATTACCAGCAGCACCGATAACATCACCCTGAAAATTGACACTGCAGTAGTGCTGGCAACCCGTAAATATGTAGATGATAAGGCGCTGGAGCTGAAGGTATATGTAGACGACCTGATGGCAAAGCATCTTGCTGCGCCGGACCCGCATTCACAGTATGCGCAGAAGGACAGCCCTACACTCACAGGGATTCCAAAGGTACCGACGCCAGCGGCGGGTAACAGCACTAAACAGATTGCAAACACGGAATTTGTGGCATCGTCTATCGCGGCAATAGTGGATTCTGCGCCTGCAGCACTGGATACGCTGAACGAGCTGGCAGCGGCTCTGGGGAATGACCCGAACTTTGCCACGACGATGATAAACGCTCTGGCTGGAAAGCAACCGCTGGACAATACACTGACGAATTTAAGCGGAAAAGATGTAGCTGGTCTTCTTGCATACCTCGGTTTAGGCGAAACGATAAATCTGGCCACTGGCGCCATGCAAAAAGACCAGAACTTGAATGATGTGCCAGATAAAGCGCTGGCCCGTCAGTCCCTCCAGCTTGGCAACAGCGCTACACTCAACGTCGGCACCACACCAGACACTGTAGCCGCTGGTGACGACATCCGTATTTCCACCGCCAAAAGAGCTATAGACGACACCCAGACCGGTCTTGGTGCTCAGCCCGTTATGTGGGTAAGTACCGCCGATGATTTGAGCATTCTGCCGTCTGGTGCTCGCCGGTTTGCCAGCAATAAAGCTCCGGCAACAATATTGCCGGTAAACGATTATGTTTTCCTGGAAGTGATTGCCAAACGCGATTGCGTAGACGGCTGCGCCGTTCTGATAACAGACTCAGTTGGTAACACCTGGATTGGCGCGCGCTGGGACGCAACCAATGATTCCGGGTTTACCTGGCGTCCCCTGATGTCGTGTCCGCCCGGCGTTCCCCTTCCGTGGCCGTCTGACACCATCCCTGCTGGTTACGCCCTGATGCAGGGGCAAGCATTTGATAAGAACGTTTATCCCTTACTGGCAATAGCATATCCATCCGGCACTATTCCGGACATGCGCGGCTGGACAATCAAAGGCAAGCCCGCGAGCGGGCGCGCTGTGCTATCTCAGGAGCTGGATGGCAACAAATCGCACAGTCACAGCGCCAGAGCGCAGGATACCGATCTGGGAACGAAAGGTACGTCGTCATTTGATTACGGAACGAAGAGCTCTAATACAACAGGCGGTCATAACCATTCGGCGGGCGGCACATACGGTGGTGATTCAATCGGTGGAAAAATTCGCGTCCAGCATGATGGCAATGACCAGTTAACAAGCTGGAATGGCGATCACGCACATACCACATGGATTGGTCCGCATGACCACACTGTATATATCGGCCCACACGGCCACGTCGTTATTGTGGACGCAGACGGTAATGAGGAAACAACGGTTAAAAACATTGCATTTAATTACATAGTGAGGCTTGCATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
6a05465fc59eff59ab29bd0e17fa6fa790303f4797fe2c1484b09e5f1f8fb7be
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7313
Evidence 0,7313
Download PDB

Literature

Title Authors Date PMID Source
Characterization of the ELPhiS Prophage from Salmonella enterica Serovar Enteritidis Strain LK5 Hanna,L.F., Matthews,T.D., Dinsdale,E.A., Hasty,D. and Edwards,R.A. 2012 22247173 GenBank
High-throughput Identification of Horizontal Gene Transfer: Detection of Viable Phage in Salmonella enterica serovar Enteritidis Farris,L.A., Busch,J., Cassman,N., Dinsdale,E., Hasty,D. and Edwards,R. 2012-03-15 — GenBank