Protein

View in Explore
Genbank accession
AFV50953.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MINQRYGLDQKELGISVDKWALYEAAQYCDQMVPDGKGGTEPRYLCDVIIQSQTDAYKVIRDICSIFRGMSFWNGESISVIIDRPREPAYIFTNDNVVNGDFSYTFASEKSMYTTCNVMFDDEQNMYQQDVEPVFDREATLRFGNNVTSITAIGCTRRSEANRRGRWILKTNLRSTTVNFATGLEGMIPTIGDVVAIADNFWSSNLTMNLSGRLLEVSGSQIFLPFRVDARAGDFIIVNKPDGKPVKRTISSVSADGKTIEVNIGFGFPVKPNTVFAIDRTDIALQQYVVTKIDKGDDDEEFTYKITAVEYDPNKYDEIDYGVNIDDRPTSIVEPDQIPRPENVQVSSESRIVQGMSVETMIVSWDKVPYAVFYDVQWRKDNGNWQNVPQTANKEVYVEGIYAGNYQVRVRSVAGSGTTSGWSNIVAATLTGKQGEPGRPINLTATDDVVFGIRTKWGFSDGSGDTAYTELQQSPDGTVDNASLLSLIPYPQHEYYHSPMPGGNIVWYRVRTVDRIGNVSQWTDFVRGMASTNVDDIIGEISVDIENSPGYEWLVDNATDNAAQNAANAEAAIENALANDKDAIYMKKENGKRKAEYTKSLQLIADETQARVTAVEQLKASFGDQISASNSELREVIATETEALSSEIDQLKAQIGDDIQASLTDIRKAIANETEARTQADLALSARLGDNEAALAQKLDSWSNASSTGAMYGVKLGLKYNGQEYSAGMAMSLIGSGAAVKAQILFEASRFAIMTGMNGQTQYPFVVEGNQVILNSAIIKNGFITNAMIGNVIQSNNYVVNKAGWRLDKGGTFENYGSDGEGAMKQTNTTISVRDANGRLRVQIGRLTGSW
Physico‐chemical
properties
protein length:851 AA
molecular weight: 93748,49370 Da
isoelectric point:4,71237
aromaticity:0,08813
hydropathy:-0,36122

Domains

Domains [InterPro]
DC_0014
STR
1–851
DC_0014
IPR053171
Unmapped
2–574
IPR053171 IPR015406
IPR032876
ATT
52–200
IPR032876 IPR013783 Coil
IPR036116
STR
340–427
IPR036116
IPR003961
STR
340–434
IPR003961
AFV50953.1
1 851
Architecture
STR
ATT
STR
STR 1-51 | ATT 52-200 | STR 201-851
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage ADB-2
[NCBI] 		1216926 Uroviricota > Caudoviricetes > Drexlerviridae > Tunavirus > Tunavirus ADB2
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFV50953.1 [NCBI]
Genbank nucleotide accession
JX912252.1 [NCBI]
CDS location
range 30864 -> 33419
strand +
CDS
ATGATTAATCAGCGATACGGGCTGGATCAGAAGGAGCTTGGAATCTCCGTCGATAAATGGGCGCTTTATGAGGCGGCGCAATATTGCGACCAGATGGTTCCCGACGGGAAAGGTGGTACGGAGCCTCGCTACCTTTGCGACGTGATAATTCAGTCACAGACTGATGCGTACAAGGTGATTCGAGATATTTGCTCAATCTTTCGAGGTATGAGCTTTTGGAATGGCGAAAGCATTTCGGTAATCATCGACAGGCCGCGTGAACCTGCGTACATCTTCACTAACGACAACGTTGTTAATGGTGACTTCTCATATACGTTCGCAAGCGAAAAGAGTATGTACACGACGTGTAACGTGATGTTTGATGATGAACAAAACATGTATCAGCAGGACGTTGAGCCAGTATTCGATCGTGAGGCTACTCTACGGTTTGGTAACAACGTAACGAGTATTACGGCGATCGGATGCACGCGTCGAAGCGAGGCTAACCGACGAGGACGATGGATTCTGAAAACCAACCTCCGCAGCACTACGGTAAACTTCGCGACCGGGCTTGAGGGCATGATCCCGACAATAGGTGATGTTGTGGCAATAGCCGACAACTTCTGGTCAAGCAACTTAACTATGAACCTATCAGGGCGCTTGCTTGAAGTGTCTGGAAGCCAGATTTTCTTGCCGTTCCGTGTGGATGCGCGCGCAGGTGACTTTATTATCGTAAATAAGCCCGACGGCAAGCCCGTGAAGCGCACAATCTCAAGTGTTAGTGCGGATGGTAAGACTATAGAGGTTAACATTGGCTTTGGCTTTCCTGTGAAGCCTAACACGGTATTCGCTATCGACCGCACCGACATTGCGCTACAACAGTACGTCGTGACAAAAATCGATAAGGGCGATGATGACGAGGAATTTACCTACAAAATCACGGCGGTGGAGTACGATCCTAACAAGTACGACGAGATTGATTACGGTGTGAACATCGACGACCGACCGACGAGTATCGTTGAACCAGACCAAATCCCTAGACCGGAAAACGTGCAAGTGTCATCTGAGTCACGAATCGTCCAGGGGATGAGCGTAGAGACGATGATTGTTAGCTGGGATAAAGTTCCGTACGCTGTTTTCTATGACGTGCAGTGGCGAAAAGATAACGGAAACTGGCAAAATGTACCTCAGACGGCAAACAAAGAGGTTTACGTTGAGGGTATTTACGCTGGCAACTATCAGGTTCGCGTGCGCTCCGTCGCTGGTTCGGGTACGACTTCGGGCTGGTCAAATATCGTCGCGGCAACGTTGACGGGTAAACAGGGTGAACCGGGACGACCGATTAACCTTACAGCTACGGATGATGTTGTTTTTGGTATCCGTACAAAATGGGGGTTCTCTGATGGTTCTGGAGATACGGCATATACAGAGTTGCAACAGTCACCAGATGGAACAGTGGATAACGCAAGTTTGCTTTCTTTGATTCCATACCCGCAGCATGAGTATTATCACTCACCGATGCCGGGAGGGAATATTGTGTGGTATCGGGTAAGGACGGTTGACAGGATCGGTAACGTGTCTCAGTGGACTGATTTTGTCAGAGGCATGGCATCAACAAACGTTGACGATATCATTGGGGAGATTTCTGTCGATATCGAAAACTCGCCGGGTTACGAGTGGCTTGTTGATAACGCAACCGACAACGCGGCGCAGAACGCAGCGAACGCAGAGGCAGCAATTGAGAACGCACTAGCTAATGACAAAGACGCGATCTACATGAAGAAGGAGAACGGAAAACGAAAAGCAGAGTACACCAAATCACTGCAACTAATTGCTGATGAGACTCAGGCGCGAGTAACAGCAGTCGAGCAATTGAAGGCAAGTTTTGGAGATCAGATTAGCGCAAGCAACAGCGAATTGCGTGAAGTTATCGCAACTGAAACTGAGGCTTTATCGAGTGAGATTGATCAGCTTAAGGCTCAGATTGGTGACGATATTCAGGCGAGTTTGACCGATATCCGCAAGGCTATCGCAAATGAAACTGAGGCGAGAACGCAAGCCGACTTGGCGTTAAGTGCGAGGCTTGGGGATAATGAGGCGGCGCTTGCTCAAAAATTAGACTCTTGGAGCAATGCCAGTTCTACCGGGGCAATGTACGGCGTCAAGCTGGGTCTGAAATACAACGGGCAGGAATATAGCGCAGGCATGGCTATGTCTCTGATTGGTTCCGGCGCAGCTGTTAAGGCGCAAATTCTATTCGAGGCGTCACGATTTGCAATCATGACAGGGATGAACGGTCAGACTCAGTATCCTTTCGTTGTTGAAGGTAATCAGGTGATTCTTAATAGCGCCATCATTAAGAACGGATTCATCACGAATGCGATGATTGGTAATGTTATTCAATCGAATAACTATGTCGTTAACAAGGCTGGCTGGAGACTTGACAAGGGTGGAACATTCGAAAACTACGGAAGTGACGGTGAGGGTGCAATGAAACAAACTAACACCACAATATCTGTTAGGGATGCGAATGGTCGCCTGAGGGTTCAGATTGGCAGGTTGACTGGCTCATGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
433379309e73909a5b6245b3f4180e6aa2c93d275a51727d8b3b6eaef583bd20
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7764
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Escherichia Phage ADB-2 Isolated from a Fecal Sample of Poultry Bhensdadia,D.V., Bhimani,H.D., Rawal,C.M., Kothari,V.V., Raval,V.H., Kothari,C.R., Patel,A.B., Bhatt,V.D., Parmar,N.R., Sajnani,M.R., Koringa,P.G., Joshi,C.G., Singh,S.P. and Kothari,R.K. 2013 23516186 GenBank