Protein

View in Explore
Genbank accession
UKL14938.1 [GenBank]
Protein name
GDSL hydrolase
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MAWYTEGTISLVQNSKVATGTGTEFLANTRYGDILFVNGEVYEIMGAVNDLQLNLVKQYTGPTQLNQSYSLIRNMTNASNYDLMRAIDEMLGERNTQLNQFTVWSSGTVNGGPEGDGRYPLTNRFGVTQLVYCPAKMAQLSGTQDQIDLSQILIDIENIQTLLKDYGTLEAKLNALVGVDLAKLGGQPKNAKLTQISAIEMKLNQVLVASGEETFSVMDISDRGKALIAAETAAEMRSVMGVATGGTGSGNSGSGGVPGRRVAILGTSLCQLCNYGTATEISMTNRSWIGWAAILTNNKIMTPIWWDRGLYPGWEVSDHVGDPRGFRGLNAGVSSDHADNIFNRASYLVANVDCEFVVMDSGINDIGDNSLTSDAISALREKTVDYLLANGKTVIMLTLLSPAASYYPIGSTQRRKMERVNNRAREFAAQRKNMYLFDWTEYMMDFNDPNGQPKPLHSVDGLHFAPRGAFAVGKGLAKLFSTFLPDAPRVVWSPEDIYDSVLAPQGNLMTNSFCYGNSGTLDAGATGNVANSMRGGINSGDGTAFYEKLARADGRGQWQQITVTPGTAETQALFRVTDITHGLPEGTWVQGTVEVECDAWEYWAGINLQMRDLAVGGLTCHGLKSYSGFPMPAEAWSGTILTPAFQVKAGGQLRWRFEATAQANATGKGVVRVGAVGLRVTIDPKIIVNAR
Physico‐chemical
properties
protein length:691 AA
molecular weight: 74771,63890 Da
isoelectric point:5,34783
aromaticity:0,08394
hydropathy:-0,16802

Domains

Domains [InterPro]
DC_1966
ATT
1–437
DC_1966 DC_0391
IPR051532
Unmapped
213–488
IPR051532
IPR036514
STR
257–481
IPR036514
SSF52266
STR
260–478
SSF52266
cd00229
ENZ
330–479
cd00229
UKL14938.1
1 691
Architecture
ATT
STR
RBD
ATT 1-437 | STR 438-481 | RBD 482-681 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage hairong
[NCBI] 		2912595 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas syringae pv. actinidiae
[NCBI] 		103796 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UKL14938.1 [NCBI]
Genbank nucleotide accession
OM223115 [NCBI]
CDS location
range 28600 -> 30675
strand +
CDS
ATGGCGTGGTATACCGAAGGGACGATCAGTCTCGTTCAGAATTCTAAGGTGGCGACCGGTACCGGAACTGAGTTCCTGGCCAACACACGCTATGGCGACATCCTGTTCGTCAATGGTGAAGTCTACGAAATTATGGGCGCAGTCAATGACTTGCAGCTCAATCTGGTCAAGCAGTACACGGGTCCGACACAGCTCAATCAATCGTACTCGCTGATCCGCAACATGACCAACGCCAGCAACTACGACCTCATGCGGGCCATCGACGAAATGCTGGGCGAGCGCAACACACAGCTCAATCAGTTCACGGTCTGGTCCAGCGGTACGGTCAATGGCGGGCCAGAAGGTGACGGGCGCTACCCTCTGACCAACCGCTTCGGTGTAACGCAGCTCGTCTACTGCCCAGCCAAGATGGCTCAGTTGTCCGGTACCCAGGATCAGATTGACCTGAGTCAGATTCTGATCGACATCGAAAATATCCAGACGCTACTCAAGGACTACGGCACTCTGGAAGCCAAGCTGAACGCTCTTGTGGGAGTGGACTTGGCCAAGCTGGGTGGTCAGCCGAAGAACGCGAAGCTCACTCAGATCAGCGCCATCGAAATGAAGCTGAACCAGGTTCTGGTAGCCAGCGGGGAAGAGACATTCAGCGTGATGGACATCAGCGACAGGGGCAAGGCTCTGATCGCAGCAGAGACAGCGGCCGAAATGCGCTCTGTGATGGGCGTAGCAACGGGCGGAACCGGTTCGGGTAACTCGGGCAGCGGTGGTGTTCCAGGTCGTCGTGTAGCGATTCTGGGCACCTCTCTGTGTCAGTTGTGCAACTACGGTACCGCAACCGAAATCTCGATGACCAACCGCTCCTGGATTGGCTGGGCGGCGATCTTGACCAACAACAAGATCATGACACCCATCTGGTGGGATCGCGGCCTGTACCCAGGCTGGGAAGTCTCTGATCACGTTGGCGATCCACGAGGGTTCCGCGGACTGAACGCCGGCGTGTCGAGTGACCACGCAGACAACATCTTCAATCGCGCCAGCTATCTGGTTGCCAACGTGGACTGCGAGTTCGTTGTCATGGACAGCGGCATCAACGACATCGGTGACAACAGTCTGACCAGTGATGCGATCAGCGCTCTTCGCGAGAAGACGGTCGACTACCTGCTCGCCAACGGGAAGACGGTGATCATGCTGACGCTGCTGAGCCCGGCCGCCAGCTACTACCCGATCGGTTCGACACAGCGCCGTAAGATGGAGCGCGTGAACAACCGCGCCCGCGAGTTCGCTGCACAACGCAAGAACATGTACCTGTTCGACTGGACCGAGTACATGATGGACTTCAATGATCCCAACGGTCAGCCAAAGCCACTGCACTCTGTTGACGGTCTTCACTTTGCACCTCGTGGCGCCTTCGCTGTAGGTAAAGGGCTGGCCAAGCTGTTCAGTACCTTCTTGCCTGATGCACCTCGTGTAGTCTGGTCGCCAGAGGACATCTACGATTCTGTCCTGGCACCACAGGGCAACCTGATGACCAACAGCTTCTGCTACGGCAACAGCGGTACGCTCGATGCTGGCGCTACAGGCAACGTCGCGAACAGTATGCGCGGCGGCATCAACAGTGGTGACGGCACCGCGTTCTACGAGAAGCTGGCCCGCGCAGACGGTCGCGGTCAGTGGCAGCAGATCACAGTGACACCCGGCACCGCAGAGACGCAGGCGCTGTTTCGTGTGACTGACATCACACACGGTCTTCCAGAAGGCACCTGGGTTCAGGGCACCGTCGAGGTCGAATGCGATGCCTGGGAATACTGGGCAGGTATCAACTTGCAGATGCGTGACCTTGCAGTGGGCGGACTGACCTGTCACGGCCTGAAATCCTACTCGGGGTTCCCGATGCCGGCCGAAGCCTGGTCTGGTACTATTCTGACCCCAGCCTTTCAGGTGAAAGCGGGCGGGCAATTGAGGTGGCGCTTTGAAGCGACCGCACAGGCAAACGCAACCGGCAAAGGCGTTGTACGAGTGGGCGCTGTTGGTCTTCGCGTAACAATCGATCCAAAAATCATCGTCAACGCGAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e5b4a02115abb3ad65bb3c94eb67c1daa8faac97c38a355b3253b70196e4a519
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7717
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of two nickie-like bacteriophages that infect the kiwifruit canker phytopathogen Pseudomonas syringae pv. actinidiae Zhang,H., Wu,H., Xia,H., Zhong,C., Li,L. and Zeng,C. 2022 — GenBank