Protein

View in Explore
Genbank accession
CEK40235.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MRDRIYIVDINTKMYQIARYKQNDNNVSYNMRIVQDSIDVDLTGYTALAFFNLPSGRVTQKNCTIEDSTVYTELSHIELSEEGDVISEITLYKDDKVVTTFSTIIKVEKSINRNAIEDEPSWDIIKDILNVLSYEEERQENENVRKSNEEIRISSENVRIGNENIRIESENQRKDSEVERCESEEVRKTQEVTREANEETRKTSETTREANEEIRKTSEITREANEEIRKTNEIVRESSEETRNTNEETREAHETVRESNEEIRKTSEETRESNENTRKASEEIRNGSEETRVANEVARQESETTREENEDLRKSNEETRKENEEIRKSNENTRKTSEEIRNTSEETRNTNEEVRKASEEIRNTSETTRNTNEEARKVSETTRETNEETRKANEIIRQNSETKREENEELRKSNEVTRELNESTRQTSIINMQKKVDDKVDEVDNKIVEVNTAKTDMTTTVSNKITEFEKRFNELENLDTAGEILQSKETTDGQIKDTLKERLTYDFNKLDLKIEQLIAGGINVAFNKSYDTSEWVEVDGGFELSVEHNLVTQKILVSSIDKLNRKSLITSYKIMDDNNIILFNEVAIDIEVTVVNGGSAIELIKFTINDDIESLESAYSSIETKRLLKDGLDKKANLEHTHDIYVEKVEGKELSTEDYTTEEKEKLSQLDTYKNKETKFNTNGSITETLDNSIKYITKFNTNGSISKEKYINDILINTTITNFKNGMIEESVTNEGVI
Physico‐chemical
properties
protein length:739 AA
molecular weight: 85695,73210 Da
isoelectric point:4,73090
aromaticity:0,04330
hydropathy:-1,08498

Domains

Domains [InterPro]
IPR050903
Unmapped
102–281
IPR050903 DC_0386 Coil DC_1694
Coil
Unmapped
134–154
Coil Coil Coil Coil Coil
CEK40235.1
1 739
Architecture
STR
STR
STR 282-382 | STR 523-739
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage phiCD24-1
[NCBI] 		1582149 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CEK40235.1 [NCBI]
Genbank nucleotide accession
LN681534.1 [NCBI]
CDS location
range 21415 -> 23634
strand +
CDS
TTGAGAGATAGAATTTATATTGTAGATATCAACACAAAGATGTATCAAATAGCAAGATATAAGCAAAATGATAATAATGTATCTTATAACATGAGAATAGTACAAGACTCTATAGATGTTGATTTAACTGGATATACAGCATTAGCATTTTTTAATTTACCAAGTGGAAGAGTTACTCAGAAAAATTGTACTATAGAAGATTCAACTGTTTATACTGAATTAAGTCATATAGAGCTTTCAGAAGAAGGAGATGTTATTTCTGAGATAACTTTATATAAAGACGATAAGGTAGTTACTACGTTTTCTACAATAATAAAAGTTGAAAAAAGTATAAATAGAAATGCAATAGAGGATGAGCCTAGTTGGGATATAATAAAGGACATATTAAATGTATTAAGTTATGAAGAAGAAAGACAAGAAAATGAAAATGTAAGAAAATCTAATGAAGAAATTAGAATAAGTTCTGAAAATGTTAGAATTGGCAATGAGAATATAAGGATTGAAAGTGAAAATCAGAGAAAAGATAGTGAAGTTGAAAGATGTGAGAGTGAAGAAGTAAGAAAAACACAGGAAGTTACTAGAGAAGCTAATGAAGAAACAAGAAAAACAAGTGAAACGACAAGAGAAGCCAATGAAGAAATAAGAAAGACAAGTGAAATAACAAGAGAAGCTAATGAAGAAATAAGAAAAACAAATGAGATAGTCAGAGAGTCAAGTGAAGAAACAAGAAATACTAATGAAGAAACAAGAGAAGCTCATGAGACTGTTAGAGAATCAAATGAGGAAATAAGAAAAACTAGTGAAGAAACTAGAGAATCAAATGAAAATACGAGAAAAGCAAGTGAAGAGATAAGAAATGGTAGCGAAGAAACAAGAGTTGCTAATGAAGTAGCTAGACAAGAATCAGAAACTACAAGAGAAGAAAACGAAGACCTTAGAAAAAGTAATGAAGAAACAAGAAAAGAAAATGAAGAAATAAGAAAAAGTAATGAAAATACTAGAAAAACAAGTGAAGAAATAAGAAACACTAGTGAAGAAACAAGAAATACTAATGAAGAAGTTAGAAAAGCAAGTGAAGAAATAAGAAACACTAGTGAAACAACCAGAAATACCAATGAGGAAGCTAGAAAAGTTAGTGAAACAACAAGAGAAACAAATGAAGAAACAAGAAAAGCAAATGAAATAATAAGACAAAATTCAGAGACTAAACGAGAAGAGAATGAAGAGCTTAGAAAAAGTAATGAGGTAACTAGAGAACTAAATGAGTCAACTAGGCAGACATCTATAATTAATATGCAGAAAAAAGTAGATGATAAAGTAGATGAGGTTGATAACAAAATAGTTGAAGTAAATACTGCTAAGACAGATATGACAACAACTGTTAGCAATAAAATAACTGAGTTTGAAAAAAGGTTCAATGAATTAGAAAATTTAGATACAGCAGGAGAAATATTACAATCAAAAGAAACAACAGATGGTCAGATAAAAGATACTTTAAAAGAAAGATTAACTTATGATTTTAATAAACTAGATTTAAAAATAGAGCAACTTATTGCTGGTGGAATAAATGTAGCATTTAATAAATCATATGATACGTCTGAATGGGTTGAAGTTGATGGAGGATTTGAACTTTCAGTAGAACATAACCTTGTTACTCAAAAAATATTAGTTTCTTCAATAGATAAACTTAATAGGAAAAGTTTAATTACATCTTATAAAATTATGGATGACAATAATATAATACTGTTTAATGAAGTTGCTATAGACATTGAAGTTACAGTAGTTAATGGTGGTTCTGCTATTGAACTTATAAAATTTACTATTAATGATGATATAGAGTCTCTTGAAAGTGCTTATTCTAGTATAGAGACAAAAAGATTATTAAAAGATGGATTAGATAAAAAAGCTAATTTAGAACATACTCATGATATATATGTTGAGAAAGTTGAAGGCAAAGAACTATCTACAGAAGATTATACAACTGAAGAAAAAGAAAAACTTTCTCAATTAGATACTTATAAAAATAAAGAAACAAAATTTAATACAAATGGTTCTATAACAGAAACATTAGATAATAGTATCAAGTATATTACAAAGTTTAATACAAATGGCTCTATATCAAAAGAAAAGTATATAAATGATATATTAATAAATACAACAATAACTAACTTTAAAAATGGAATGATAGAAGAATCTGTTACAAATGAAGGGGTGATTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
ab9bb39fb2985a6a8453519b77565ae377403329ec5881bd0e0361b6bbe23e38
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6817
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole Genome Sequence and Molecular Characterization of Siphoviridae / Myoviridae Phage Infecting Clostridium difficile Monot,M. 2011-08-01 — GenBank