Protein

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Genbank accession
QAS68875.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MADTTIIDAVVFPQDDGTGVSNGDEDYDSAGYLASLARYAGDGSYVGGDSTGSPTLQFANIDTANEEVDIQPGHAFILESGHIVQSGSQKTYDTNLPDSVPYVVILPSSVTNVPLDTDVDNDVWLAVDPTSNDSVYIRSGNGLSAPSDPSVKLGTVNSSTGSTTRPNDLADHSVDALNATTIDASDTVTGDTVDATTTLTDAAGVSHTGELEDINHGSKHEDGGSDEISVGGLSGDLADPQDPKAHAASHSADSADEISVENLSTTGSADTVPISQGDGTLSMGSIVPTDLQWREDSNSPQTDTNVGTSTYTIADTFDEYLIRVQVFEESSAPGTVELRAEGNSQSSYDYISEDGTTTSAATSIPCIELQADSSTISVFGASGRFSGQWEFRSQPNTSTNLATAGFLAVISSPLGSLELFRAANNFSVTWEVFGRDIGPAGVP
Physico‐chemical
properties
protein length:443 AA
molecular weight: 45937,51820 Da
isoelectric point:4,05003
aromaticity:0,06095
hydropathy:-0,31467

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Haloferax tailed virus 1
[NCBI] 		2507575 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Haloferax sp.
[NCBI] 		2253 cellular organisms > Archaea > Methanobacteriati > Methanobacteriota > Stenosarchaea group > Halobacteria

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QAS68875.1 [NCBI]
Genbank nucleotide accession
MG550112.1 [NCBI]
CDS location
range 21461 -> 22792
strand +
CDS
ATGGCAGACACGACGATCATTGACGCGGTTGTGTTCCCGCAAGACGACGGGACGGGAGTGTCGAATGGAGATGAAGACTATGATAGTGCCGGGTATCTCGCATCCCTCGCCAGATACGCGGGAGATGGTTCATATGTTGGTGGCGATTCTACCGGTTCGCCAACGCTTCAATTCGCAAACATCGACACGGCGAATGAAGAAGTGGACATTCAACCGGGGCATGCGTTCATCCTCGAAAGTGGACATATTGTGCAATCCGGGAGTCAAAAAACATACGACACGAACCTTCCAGATAGCGTCCCGTATGTCGTCATCCTGCCGTCGAGCGTTACAAACGTCCCGTTGGACACGGACGTTGACAACGATGTTTGGCTTGCGGTTGACCCCACGTCTAATGACTCGGTTTATATCCGGAGTGGGAACGGCTTGAGTGCCCCAAGCGACCCCTCGGTAAAACTCGGAACGGTTAATAGTTCCACTGGGAGCACAACGCGTCCCAACGACCTTGCAGACCACTCGGTTGATGCGCTAAATGCCACAACCATCGACGCATCCGATACCGTCACGGGGGACACGGTTGACGCGACAACGACGCTAACGGACGCTGCGGGAGTCTCGCATACCGGGGAGCTTGAAGACATCAATCACGGTAGCAAACACGAGGATGGCGGCAGTGACGAAATCTCGGTGGGTGGTCTTTCGGGAGACTTAGCGGACCCACAAGACCCCAAAGCACACGCGGCCTCACACTCCGCGGACTCGGCTGACGAAATCTCGGTCGAGAATCTTAGCACGACGGGCAGTGCGGATACGGTCCCGATAAGTCAAGGAGATGGGACATTATCTATGGGTTCTATTGTCCCCACCGACTTGCAATGGCGTGAGGATTCAAATAGCCCACAGACAGACACTAACGTTGGCACATCAACATATACGATTGCAGACACGTTTGACGAGTACCTAATCCGCGTCCAAGTCTTTGAGGAATCATCTGCTCCGGGGACGGTGGAGTTGCGCGCGGAAGGCAATAGTCAATCGTCATATGATTATATTTCCGAAGACGGGACAACAACTTCGGCGGCGACTTCTATCCCCTGCATTGAATTGCAAGCGGATTCGTCAACAATATCCGTGTTCGGCGCGTCGGGGAGATTCTCCGGGCAGTGGGAATTTAGGTCGCAACCTAACACGTCAACTAATCTTGCGACGGCAGGATTCTTGGCAGTTATCTCATCGCCATTAGGGAGTCTCGAACTTTTTCGCGCAGCGAATAACTTTAGTGTGACGTGGGAAGTCTTTGGACGTGACATTGGCCCGGCAGGTGTTCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b3e344c39f9c53da653df098c31d690382b11564d71e1896c0daf0bc3bf533ad
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5951
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel haloarchaeal viruses from Lake Retba infecting Haloferax and Halorubrum species Mizuno,C.M., Prajapati,B., Lucas-Staat,S., Sime-Ngando,T., Forterre,P., Bamford,D.H., Prangishvili,D., Krupovic,M. and Oksanen,H.M. 2019 30920125 GenBank