Protein

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Genbank accession

GENB_cd3b085b6cce [GenBank]

Protein name

tail fiber protein

RBP type

Evidence Phold

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,88

Evidence RBPdetect2

Probability 0,73

Protein sequence

MNPQFAQPKGSTSKESNKDSIARKFGCKKSEVVYAKAGQSLSGYKVIYDKLSQRAYALPSNIGAVTVTSLVDGILTHSGGTVDLGKLAVSREEYVTLSGSFSSGVTLNVKNELLTHTNGKYRWDGALPKTVAPGSTPATTGGIGLGAWVSVGDAALRSDLTDLISFVPDNPHEKLNSAYDDNNTLSVSTWNIQSYQVISSRYGRNITSPKRFFDLSNFITQTAPQIVGMQEAYDGPSAHMSNLAVEPYVDESFGYGSVNTDTINLMVGYRAGNSTLSAYPLSENKVIRVTDEGTYIRLASRDTLNHPIIGKIAIYNVHGSWFEAAAMQLYSDIISDYKTLGVTKVIVIGDFNHDTTEPWFSAFTDDGFTIVNNMNYDTRNDGSGSWYIDNIIIKGFTVQDVQVSAPDPSLSDHKMLTAILKVA

Physico‐chemical properties

protein length:	423 AA
molecular weight:	45918,80630 Da
isoelectric point:	5,63589
aromaticity:	0,09456
hydropathy:	-0,22388

Domains

Domains [InterPro]

G3DSA:3.30.2020.50
ATT
1–93

G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR036691

DC_0071
STR
1–414

DC_0071

IPR040775
RBD
88–153

IPR040775 IPR036691

IPR005135
STR
189–413

IPR005135

GENB_cd3b085b6cce

1 423

Architecture

ATT

STR

ATT 1-162 | STR 163-423

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:3.30.2020.50	ATT	G3DSA:3.30.2020.50	1	93	Merged direct domain	G3DSA:3.30.2020.50	N-terminal	Low	Positional only	289 proteins / 289 hits
DC_0071	STR	DC_0071	1	414	Novel HMM	DC_0071	Central	Low	Positional only	41 proteins / 41 hits
IPR040775	RBD	DC_0821	88	153	InterPro cluster	Tail spike TSP1/Gp66, N-terminal domain	Central	High	Text match	1281 proteins / 1285 hits
G3DSA:2.10.10.80	ATT	G3DSA:2.10.10.80	94	162	Merged direct domain	G3DSA:2.10.10.80	N-terminal	Low	Positional only	383 proteins / 383 hits
IPR036691	STR	IPR036691	182	417	Merged direct domain	Endonuclease/exonuclease/phosphatase superfamily	Central	Low	Positional only	4 proteins / 4 hits
IPR036691	STR	IPR036691	183	423	Merged direct domain	Endonuclease/exonuclease/phosphatase superfamily	Central	Low	Positional only	4 proteins / 4 hits
IPR005135	STR	DC_0287	189	413	InterPro cluster	Endonuclease/exonuclease/phosphatase	C-terminal	Low	Positional only	7 proteins / 7 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

GENB_cd3b085b6cce

1 423

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	187	187	0,9572
Central domain	188	386	200	0,6705
C-terminal	387	423	36	0,3782

Note: Constraints were applied during segmentation.
Fixed 19 C-terminal predictions appearing before Central domain

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-187

Central
188-386

C-terminal
387-423

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Salmonella phage Se-I [NCBI]	2698909	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	No host information

Coding sequence (CDS)

No CDS data available.

Genome Context

Tertiary structure

PDB ID

c8cadfca161afe18df5abac0d4fbfc6ef951f84f9694f0f2f77c9c9d93902136

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,7339

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence