Protein

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Genbank accession
AXN54101.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,66
Protein sequence
MAVVSQSIPNFINGISQQTPTQRGINQGTDQINLQNNIVDGLSKRPSLEYVATLDSTNVFPNKTKIWNIQRDESNQYMCAFYNGGIKVYDLAGNSKTVTIASGSSYLTSTNPREDFKLVNIADYTFLVNKSITPTADSNTSAAKQEEFLIYVKATNYGREYTVTLTHASWSYPIKVIFQMPSGNDATTDSGFRDSDKIKDILLNGTSSTHWNGSASQIGFKTVRADTNATLSTSQGLANYSGISNYFTFESYDNVIYGKPNNNNASYTVSTSDGAGSTAMYHVRDTIQDFSKLPYYAKLNMIVKITGEEGDTLSDYYVKYTGGGVWSETIAPATSLGVTNSTMPHALINNNNGTFTFQELSWDDRVCGDSDTNANPSFIGKKIQNLTFYKNRLGILSGENLILSENAGFFNFFATTVTQVLDTDPIDISASGTQVNTLKNSVSFNETLLLFSDTAQYKLDHAGDTISPTTAILNEVSSFEHEDTVSPVAAGRFAYFCQSRNQNTAVREYYADDDTLTNDGLDITVAVQNLLPTNPYQIISNTIEDTLIFLHSDTADSQTAPYTTGSNVTATNADTMYIYKYFFDRGEKVQTAWSKWEFNGVKILGALSSDSYVYVFTAEGTNTKLFKVDLRNLKDATLGFNTYVDLKTAVTGTYSSATDLTTLTSPYGARAGLIAIDRTNGTNYTLTNTSGSTYTLKGNHTSLWIGVPFESKYILSPQYIREDTGKGLVAITSGRYQIRNISFDYENSGYFQVEVTPENRTKNTTFMTGYVIGFTGAPNNVAIATGTLRVPVQARNTAFELEIKSSSHLPMHLASAEVEGYYHRRSRRM
Physico‐chemical
properties
protein length:829 AA
molecular weight: 91306,95450 Da
isoelectric point:5,21881
aromaticity:0,11098
hydropathy:-0,35754

Domains

Domains [InterPro]
IPR058003
TTP
1–829
IPR058003
AXN54101.1
1 829
Architecture
TTP
TTP 1-829
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXN54101.1
1 829
Domain Start End Length (AA) Confidence
N-terminal 1 132 132 0,9608
Central domain 133 331 200 0,6458
C-terminal 332 829 497 0,3569
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-132
Central
133-331
C-terminal
332-829

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC109P
[NCBI] 		2283019 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter sp. HTCC7211
[NCBI] 		439493 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXN54101.1 [NCBI]
Genbank nucleotide accession
MH598805 [NCBI]
CDS location
range 22001 -> 24490
strand +
CDS
ATGGCTGTAGTATCGCAGAGTATTCCTAATTTTATTAATGGGATTAGTCAGCAGACACCCACACAAAGGGGGATTAATCAAGGGACTGACCAAATCAATTTACAAAATAATATTGTAGATGGTTTAAGTAAAAGACCTTCATTAGAATATGTAGCGACTTTAGACAGTACAAATGTGTTTCCTAATAAAACTAAAATATGGAACATTCAGCGTGATGAGTCTAACCAGTATATGTGTGCTTTCTATAATGGTGGAATTAAAGTATATGATTTAGCAGGTAACTCTAAGACAGTTACTATCGCTAGTGGTAGTAGTTATTTAACTTCAACAAATCCAAGAGAAGATTTTAAATTAGTTAATATTGCAGACTATACTTTCTTAGTAAACAAATCTATTACACCAACCGCAGATTCAAATACTTCGGCGGCTAAACAAGAAGAGTTTTTAATTTATGTTAAAGCAACAAACTATGGTAGAGAATATACAGTAACTTTAACTCATGCTAGTTGGAGTTACCCTATTAAAGTTATCTTTCAAATGCCGTCAGGTAATGACGCAACAACTGATAGTGGATTTAGAGACTCAGATAAAATTAAAGATATATTATTAAATGGTACTTCTAGTACACATTGGAATGGTAGTGCTTCACAAATAGGATTTAAAACTGTTAGAGCAGATACTAATGCTACATTATCAACGTCACAAGGTTTAGCAAACTATTCAGGAATTTCAAATTATTTTACTTTTGAATCGTATGACAACGTAATTTACGGAAAACCAAATAACAACAATGCTTCATATACTGTCAGCACTTCAGATGGTGCAGGTAGTACAGCTATGTATCATGTAAGAGATACAATACAGGATTTTAGTAAGTTACCTTATTATGCAAAATTAAACATGATTGTAAAAATTACAGGTGAAGAAGGAGATACACTTTCTGATTACTATGTAAAATATACAGGTGGTGGTGTTTGGTCTGAAACGATTGCACCTGCTACAAGTTTAGGTGTTACTAATAGTACAATGCCTCATGCTCTTATTAATAATAATAACGGAACATTTACATTCCAAGAATTATCATGGGACGATAGAGTATGTGGCGATAGTGATACTAATGCTAACCCTTCTTTTATTGGTAAGAAAATACAAAATTTAACATTCTATAAAAATAGATTAGGAATACTATCAGGTGAAAATTTAATTTTATCTGAAAACGCAGGGTTCTTTAATTTCTTTGCAACAACAGTAACGCAAGTATTAGATACAGACCCTATTGATATATCAGCGTCAGGTACACAAGTTAATACATTGAAAAATTCTGTATCATTTAATGAGACATTACTTTTATTCTCAGATACAGCACAATATAAACTTGACCACGCAGGTGACACTATCAGTCCAACAACGGCTATACTTAATGAAGTATCAAGTTTTGAACATGAAGACACAGTTTCTCCTGTAGCGGCAGGTAGGTTTGCATATTTCTGTCAATCAAGAAACCAGAATACAGCCGTTAGAGAATACTACGCAGATGATGACACACTAACTAATGATGGTTTAGATATAACAGTAGCAGTACAAAATTTACTACCTACTAACCCATATCAAATTATTAGTAATACGATTGAAGATACTTTAATATTTTTACATTCAGATACAGCAGACTCACAAACTGCTCCTTATACTACAGGGTCAAACGTAACTGCAACTAATGCAGACACTATGTATATTTACAAATATTTCTTTGACAGAGGAGAAAAAGTACAAACAGCATGGTCTAAATGGGAATTTAATGGTGTTAAAATATTAGGTGCTTTGTCTTCAGACAGTTATGTTTATGTCTTTACGGCAGAAGGAACAAATACAAAATTATTTAAAGTTGATTTAAGAAACTTAAAAGACGCAACATTAGGTTTTAATACTTATGTTGATTTAAAAACGGCGGTCACTGGGACATATTCTAGTGCTACAGATTTAACAACCCTAACTTCACCTTATGGTGCAAGAGCAGGATTAATAGCTATAGATAGAACTAACGGAACAAACTATACTTTGACTAATACGTCAGGGTCAACTTACACTCTAAAAGGAAACCATACAAGTTTATGGATAGGTGTGCCGTTTGAATCTAAATATATTTTAAGTCCACAATATATAAGAGAAGATACTGGTAAAGGATTAGTAGCAATAACTTCAGGTAGATACCAAATTAGAAATATATCGTTTGACTATGAAAACTCTGGTTACTTTCAAGTAGAAGTGACACCAGAAAATAGAACAAAAAATACAACATTTATGACAGGTTATGTAATTGGTTTTACAGGAGCTCCTAACAATGTAGCGATTGCTACAGGTACACTTAGAGTTCCTGTCCAAGCTAGAAATACAGCTTTTGAACTAGAGATTAAAAGTTCCTCACATTTACCAATGCACTTAGCTAGTGCGGAAGTAGAAGGATACTATCATAGACGTTCAAGAAGAATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bd94a38c42d881afd97cbe92b19d1d8a6eb2363ebae459644d2d8760e09a717b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8865
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50