Protein

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Genbank accession
XVB83386.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MTCFDNTYVLKLDIKEQQPNPVVRIVQFDSVYLNIELYDAGKKMELKNGERFTVSVEHEETGKKSTGMAKYDGNQFVVYELRKADMDEVGTYKARFASYENRNRVTSLQFRYEVYEDLESVGDPNELTMLQELFNEVEEVGRVTQRQGEYAEDRGDYANAAGDYANTAGDSQIMNWVPYVKTLAERSEKYPNPENGYTVYVIDENKVFRYDGIDALDWEAISGYDTSVIQDLYNTKEDKVVVKAITDAIKAELKALTIGGRNLLSGTEFNESLSFRSATNKYSIATNIGAKSLTIAPTTEYTSGSAYTFQLEKDIEKGSYVNLSFVAKPQANDGTLKFKIGNGTYSEAIALGNASDSYQTYTVSTKTDHTSGGTAIYIEQTKGLLFRADSIKVEQGNRPTAWSPSYEDLYKRIKTVRDIVDSNVSRINALELEMNTNVVKKLVYEKDKASNEEKFSKITQTADGIISEVSKKVDGKAVKSMINQSAEKIRIKASSIDFDGAVVFKNNGSKIDPNAFLKIDAGRLLTKGYYERTFRDGKKRNRIQTAQLDMGMLRVTDPQGNKIDNYGDGKGMRSLYYTSDGISTYMDGSGRAYNPKNKIMSSGTIEFFSHAYSERRGITMYAAGALGLQSYKSNVHVDAAGALYNRSRNEPIVMRPHENIRNGKNDFQFGVSSNNTGRLVYGDIGRGMGVGLRFSKSKNIKKIYGIEHNGVASSKVTLNIGAIEADKITSRNGKKQVYWNGSGGGTLSAKTSLSAGGIVSNAQSLYLGVSNEVRVTNKKGYNNGKTIGYLPIKASKFNTVSSRKYKSNIQDLEIDTLDILRKTDIKQYNLNTDIDNGINKTKYGVILEDTPEVLHEGDAIDIYGMVSILWDVVKKQQEQIEELTK
Physico‐chemical
properties
protein length:885 AA
molecular weight: 98599,33370 Da
isoelectric point:8,19511
aromaticity:0,09153
hydropathy:-0,58079

Domains

Domains [InterPro]
DC_1023
STR
4–882
DC_1023
IPR030392
CHP
801–885
IPR030392
IPR030392
CHP
801–856
IPR030392
XVB83386.1
1 885
Architecture
STR
STR 4-885
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XVB83386.1
1 885
Domain Start End Length (AA) Confidence
N-terminal 1 271 271 0,9918
Central domain 272 522 252 0,2315
C-terminal 523 885 362 0,8346
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-271
Central
272-522
C-terminal
523-885

Taxonomy

  Name Taxonomy ID Lineage
Phage Mammaliicoccus phage phi6255
[NCBI] 		3414232 Viruses >
Host Mammaliicoccus sciuri
[NCBI] 		1296 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XVB83386.1 [NCBI]
Genbank nucleotide accession
PV389083 [NCBI]
CDS location
range 32939 -> 35596
strand -
CDS
ATGACGTGTTTTGATAATACATATGTTTTAAAATTAGATATTAAAGAACAACAGCCTAATCCAGTAGTTAGAATTGTACAGTTTGACTCTGTTTATTTAAATATTGAGTTATATGATGCTGGAAAGAAAATGGAGCTAAAAAATGGAGAACGCTTTACAGTAAGTGTTGAGCATGAAGAAACTGGTAAGAAAAGTACTGGTATGGCTAAATATGATGGAAATCAATTTGTTGTATATGAGTTAAGAAAAGCTGATATGGATGAAGTCGGTACATACAAAGCTAGATTTGCTTCCTACGAAAATAGAAACCGTGTTACTTCCCTTCAATTTAGATATGAGGTTTATGAAGACTTAGAGTCTGTTGGAGACCCAAATGAATTAACTATGCTTCAAGAGTTATTCAATGAGGTAGAAGAAGTTGGTCGAGTTACTCAACGTCAAGGTGAGTATGCAGAAGACAGAGGAGATTATGCAAACGCCGCTGGTGATTATGCTAACACTGCTGGAGATTCTCAAATTATGAACTGGGTTCCATATGTTAAAACTTTAGCTGAACGTAGTGAGAAATACCCTAACCCAGAAAATGGTTATACGGTATATGTAATTGATGAAAATAAAGTATTTAGATATGACGGTATAGATGCATTAGACTGGGAAGCTATTTCTGGCTATGATACTTCCGTAATTCAAGATTTATATAACACTAAAGAAGATAAAGTTGTTGTAAAAGCAATTACAGATGCTATTAAAGCAGAATTAAAAGCTTTAACAATTGGTGGTAGAAACTTATTATCTGGTACTGAATTTAATGAATCATTGTCTTTTAGAAGTGCAACTAATAAATATTCTATCGCTACAAATATAGGAGCTAAATCACTAACTATTGCCCCTACTACTGAATATACTTCTGGAAGTGCATACACTTTCCAACTTGAGAAAGATATAGAAAAAGGAAGCTACGTTAACCTATCATTTGTTGCTAAACCTCAAGCTAACGATGGAACATTGAAATTTAAAATAGGTAACGGTACTTATTCTGAAGCAATTGCTTTAGGTAATGCTTCTGACTCTTATCAGACTTACACTGTATCTACTAAAACTGACCACACTTCTGGTGGAACTGCTATATATATAGAACAAACCAAAGGTTTATTATTCAGAGCGGATTCAATTAAAGTTGAACAAGGTAACCGCCCTACTGCTTGGTCTCCGTCTTATGAAGATTTATATAAACGTATTAAAACTGTTAGAGATATTGTTGATAGTAACGTATCTAGAATAAATGCTTTAGAGTTAGAAATGAATACAAATGTTGTTAAGAAATTAGTATATGAAAAAGACAAAGCTTCCAACGAAGAAAAGTTTTCTAAAATTACTCAAACTGCTGATGGTATTATATCTGAGGTGAGTAAAAAAGTTGATGGTAAAGCAGTTAAATCTATGATTAACCAATCAGCTGAAAAAATAAGAATTAAAGCATCAAGTATCGATTTTGACGGCGCTGTTGTATTTAAAAATAATGGCAGCAAGATTGACCCTAATGCTTTCTTAAAAATAGATGCTGGTAGATTGTTAACTAAAGGGTATTACGAAAGAACATTTAGAGATGGTAAAAAACGTAACCGTATCCAAACTGCACAATTAGATATGGGTATGTTACGTGTAACCGACCCACAAGGTAATAAAATTGACAATTATGGTGATGGCAAGGGCATGAGGTCTCTTTATTATACATCTGATGGTATTTCAACATATATGGACGGCAGTGGAAGAGCGTATAATCCTAAAAATAAAATAATGTCTTCAGGGACTATTGAGTTCTTTTCTCATGCATATTCTGAGAGACGTGGAATCACTATGTATGCAGCAGGAGCATTAGGTTTGCAATCTTATAAATCTAATGTACATGTTGATGCAGCTGGCGCTTTATATAATAGGTCTAGAAACGAACCAATTGTAATGAGACCACATGAAAACATTAGAAATGGTAAAAATGACTTTCAATTCGGTGTTTCTAGTAATAACACTGGTCGACTAGTTTATGGTGATATCGGTAGAGGTATGGGTGTTGGTTTACGTTTCTCTAAATCTAAAAACATTAAAAAAATTTACGGTATCGAACATAATGGTGTTGCTTCTAGTAAAGTAACATTAAACATCGGTGCTATTGAAGCTGACAAAATAACATCTAGAAACGGTAAAAAACAAGTTTATTGGAATGGTTCGGGTGGCGGCACATTATCTGCCAAAACTTCATTATCTGCTGGAGGTATTGTATCTAACGCTCAAAGTTTATACTTAGGCGTTTCAAATGAAGTACGTGTAACTAATAAAAAAGGTTATAACAATGGTAAAACTATTGGCTACTTACCTATTAAAGCTAGTAAATTCAACACTGTTTCAAGTCGTAAGTATAAATCTAATATTCAAGATTTAGAAATTGATACATTAGATATTCTAAGAAAAACAGATATCAAACAATATAATTTAAACACCGATATTGACAATGGAATCAATAAAACTAAGTACGGAGTAATCTTAGAGGACACTCCTGAAGTATTACATGAAGGAGATGCTATAGATATTTATGGTATGGTATCTATCCTATGGGATGTAGTAAAAAAACAGCAAGAACAAATTGAAGAGTTAACTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
99b55814baf4fc99c284d14540339f9f7e22743674fefa8a203137e716b57e07
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7921
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterisation of phylogenetically distinct temperate phages from Kenyan Mammaliicoccus sciuri Cherbuin,J.D.R. 2025-12-01 — GenBank