Protein

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Genbank accession
QDB73913.1 [GenBank]
Protein name
putative tail-fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTSILRYMQAGGQPTFDATLATAIGGYPKGAMVLGSDGVTLWQSKVDSNSTNPNVAPENWGTFDVGLKSDLAAPGGSNIVGFKQAGAGSVPRTSQDKMRERVTPLDFGAVGDGVTDDSVAIGRMITYFKSTLIPPAPGKNYDGRGVGLDFSGRNYGISSPVDFTGIDNLTVINPSLTALSGFAGNAMMVFNSIDTVWYVENTTIINPYLDGNWNANLCIDAADFLNFKIIGGKMTHYKQKGLLTRRINVGPHEVNMTGTFIFQREYNETFPVDITEGEAFEIGNYDNNFTNVVIGYQKKWTCTLASGANTFSNCHFYSGVTSWPESGVRSLDTADDFDGCYFDSVPLFIRNRSTISDCTFVIEPTKDFAIELTTLDPFLVKVTDCRFRKASGPAVVAIKMKTIADGRINRPSIYDNSFDGCESLQTRGLHPVNISATSTTLALPDQYQPLSSFGPVSLAASADGLFQERMFGQAYNSTTKQITINCYAVSGGTMIGSNLGGKQALINFN
Physico‐chemical
properties
protein length:509 AA
molecular weight: 54965,16560 Da
isoelectric point:5,09075
aromaticity:0,10413
hydropathy:-0,13752

Domains

Domains [InterPro]
DC_1737
ATT
1–63
DC_1737 IPR012334
DC_2184
STR
67–508
DC_2184
IPR011050
STR
101–423
IPR011050
QDB73913.1
1 509
Architecture
ATT
STR
ATT 1-63 | STR 65-508 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDB73913.1
1 509
Domain Start End Length (AA) Confidence
N-terminal 1 117 117 0,9899
Central domain 118 434 318 0,9906
C-terminal 435 509 74 0,9696
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-117
Central
118-434
C-terminal
435-509

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage 2_D05
[NCBI] 		2588098 Uroviricota > Caudoviricetes > Kunmingvirus >
Host Aeromonas rivipollensis
[NCBI] 		948519 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDB73913.1 [NCBI]
Genbank nucleotide accession
MK804891 [NCBI]
CDS location
range 41353 -> 42882
strand +
CDS
GTGACCAGCATTCTGCGCTACATGCAGGCCGGGGGGCAGCCCACGTTTGATGCCACATTGGCGACAGCCATCGGCGGATACCCCAAGGGAGCAATGGTGCTTGGTAGTGATGGGGTGACGCTGTGGCAGAGCAAGGTTGACAGTAACTCAACTAATCCTAACGTTGCCCCGGAGAACTGGGGTACGTTTGATGTTGGGTTAAAATCCGATCTTGCTGCGCCAGGAGGATCCAATATAGTTGGATTTAAGCAGGCTGGAGCTGGGTCGGTTCCTCGCACATCTCAAGATAAAATGAGGGAGCGTGTGACGCCCCTAGATTTCGGGGCGGTGGGGGACGGGGTCACTGATGATTCTGTCGCCATCGGTCGCATGATAACGTATTTCAAATCAACATTAATCCCTCCTGCGCCAGGGAAAAACTATGACGGGAGGGGTGTTGGGCTGGATTTCTCTGGCAGAAACTACGGAATTTCCTCCCCAGTTGATTTCACTGGCATCGACAATCTGACGGTGATCAATCCTTCATTGACCGCGCTAAGTGGCTTTGCTGGTAATGCAATGATGGTATTTAACTCCATTGACACCGTGTGGTATGTAGAAAATACCACCATCATTAACCCTTATCTGGATGGCAATTGGAACGCAAACCTGTGTATAGATGCAGCTGATTTTCTTAATTTCAAGATTATCGGCGGCAAAATGACGCACTACAAGCAGAAGGGGTTGCTGACCCGGAGAATCAACGTTGGCCCGCACGAGGTTAATATGACGGGTACGTTCATATTCCAGCGGGAATATAACGAGACCTTCCCCGTTGACATCACTGAGGGTGAGGCTTTCGAGATAGGAAACTACGATAACAACTTCACCAATGTGGTGATTGGTTATCAGAAGAAGTGGACGTGTACGCTGGCGAGCGGCGCCAACACGTTCTCGAACTGCCATTTCTATTCCGGTGTAACTAGCTGGCCTGAAAGCGGCGTGCGCTCGCTGGACACGGCAGATGATTTCGACGGCTGCTATTTCGACTCTGTGCCTCTATTCATCAGGAACAGGAGCACTATTAGCGACTGCACTTTCGTTATCGAGCCTACCAAGGACTTTGCTATCGAGCTGACAACTTTAGACCCATTCCTAGTTAAGGTGACTGATTGCCGATTCAGAAAGGCCAGCGGGCCTGCCGTTGTGGCGATAAAAATGAAGACTATCGCAGACGGCAGGATCAACAGGCCTAGCATCTACGACAACTCATTTGATGGTTGCGAGTCATTGCAGACGAGAGGCCTCCACCCTGTAAACATCTCCGCCACCTCAACTACGCTCGCATTACCCGACCAATATCAGCCCCTGTCATCCTTCGGGCCGGTTAGTCTTGCCGCCAGTGCAGATGGGTTGTTCCAGGAGAGGATGTTCGGCCAGGCGTATAACTCGACCACAAAACAGATCACGATTAACTGTTATGCGGTATCAGGGGGCACCATGATCGGGTCGAACCTGGGTGGTAAGCAGGCGTTAATCAATTTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d14c9ba1f7d18f1ae89f5cb8c3bf1602c2ede55620a2c66f5094940ddf527f32
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8116
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Nine Novel Phages from a Plateau Lake in Southwest China Provide Insights into Aeromonas Phage Diversity Xiao,W. 2019-07-05 — GenBank