Protein

View in Explore
Genbank accession
YP_214213.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,54
Protein sequence
MATTEHFYTGNGSTTSFAFTFPYLANVDVKVELDNVLKTENSSGQTNNDYTISNTNIVFNSAPGSGVIIHIYRNTNVDTAQATYAAGSSIRAVDLNNNQTQVLYSTQEAQSQIIRTTDIKDGAVNSTKIENNTIVNADINSSAAIDGSKIQASSGSNSGTMSAANFTKLGGIETGATADQTAAEIRTLVESASDSNVFTDADHTKLNGIESGATADQSVSEIKTLIAGSPLSNTHIAADADIAHSKLADVTSSQVLIGNASNVPTATSLSGDVTLNNAGVVTIANDAVEIGMIGCEQTTITDSDSHLPTSGAVVDYVSSQLAPIGGLEVIANEVSFPNTQPAAGVVISITDAGGVVFNGSGSSTTGRTLGGATVTINNAPTALNSETLVAGAGLMVSSTGSSNIYNYHKLFVKESDVVQLSDDINDFNSRYRIAASAPTSNNDEGDLYFDTAANKMFVYDGSAWGQVTSTGEFKILGIKDNGQAHNGSGPTFNGSNDRFDLFENASAADISQASQLLVVLNGVIQKPNDGSFSGTEEGYYLDGTDGIRFCDPPASGSTLFITKQGSATQINTPADNTITQAKIAVDAVDEQRLQVSNAPTNGYYLQAQSGNTGGLTWAAVPNPDLTQLSASNLTSGTIPDARFPSTLPAVSGANLTGLPPSCTGGGSDEIFWENGQTVTTNYTITNNKNAMSAGPITINNGIAVTIGTGENWTIV
Physico‐chemical
properties
protein length:715 AA
molecular weight: 73877,67670 Da
isoelectric point:4,24374
aromaticity:0,06014
hydropathy:-0,17371

Domains

Domains [InterPro]
DC_1390
STR
6–493
DC_1390
IPR005604
ATT
7–119
IPR005604 DC_1875
YP_214213.1
1 715
Architecture
ATT
STR
ATT 6-119 | STR 120-715
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_214213.1
1 715
Domain Start End Length (AA) Confidence
N-terminal 1 359 359 0,9162
Central domain 360 588 230 0,0726
C-terminal 589 715 126 0,5374
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-359
Central
360-588
C-terminal
589-715

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-SSP7
[NCBI] 		2908095 Uroviricota > Caudoviricetes > Autographivirales > Tiamatvirus > Prochlorococcus phage P-SSP7
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_214213.1 [NCBI]
Genbank nucleotide accession
NC_006882.2 [NCBI]
CDS location
range 32865 -> 35012
strand +
CDS
ATGGCGACAACTGAACATTTTTATACAGGCAATGGATCCACCACATCCTTTGCCTTTACATTTCCATACTTAGCGAATGTCGATGTCAAAGTTGAACTCGACAACGTATTAAAAACTGAAAATTCAAGTGGTCAAACAAATAATGACTACACCATTTCTAATACAAATATTGTCTTTAACTCAGCTCCTGGAAGCGGTGTTATAATACATATTTATAGAAATACTAATGTTGACACTGCTCAAGCAACTTATGCAGCGGGATCTTCAATTCGTGCTGTTGATCTAAATAACAACCAAACACAGGTTTTATATTCAACTCAAGAAGCACAGTCCCAAATAATAAGGACAACTGATATAAAAGACGGTGCTGTAAATAGTACCAAAATCGAAAACAATACGATTGTAAATGCTGATATCAATTCGTCAGCAGCAATTGACGGTTCAAAAATACAGGCATCTTCTGGCTCTAATTCCGGAACTATGTCTGCAGCTAATTTCACAAAATTAGGAGGAATTGAAACTGGAGCCACAGCAGATCAAACTGCGGCAGAAATAAGAACTCTTGTAGAAAGTGCTTCCGATAGTAATGTATTTACTGATGCTGATCATACTAAGCTTAATGGCATAGAGAGCGGGGCTACCGCAGATCAGTCAGTATCTGAAATTAAAACTCTTATTGCTGGTTCTCCTTTAAGCAATACACATATAGCTGCTGATGCAGATATAGCTCATAGTAAATTAGCTGACGTAACATCTAGCCAAGTCTTAATTGGTAATGCTAGTAACGTACCAACAGCTACAAGTCTTAGTGGTGACGTAACTTTAAACAACGCGGGTGTGGTGACCATAGCTAATGATGCTGTGGAAATAGGAATGATTGGTTGTGAACAAACAACTATTACTGATAGTGATTCACACCTACCTACTTCTGGAGCTGTCGTTGATTATGTGTCTTCCCAACTAGCACCAATCGGTGGACTAGAAGTTATAGCTAATGAAGTAAGTTTCCCTAATACACAACCAGCAGCTGGTGTAGTTATATCTATTACAGATGCAGGCGGAGTTGTATTTAATGGCTCAGGTTCAAGTACAACTGGACGAACTCTTGGTGGTGCGACAGTAACTATTAATAATGCGCCAACAGCTTTAAATTCAGAAACGTTAGTAGCTGGTGCTGGCTTAATGGTCAGTTCAACAGGTTCAAGTAATATCTATAATTACCATAAATTATTTGTTAAAGAATCTGATGTTGTTCAGTTATCTGACGATATTAATGACTTTAACAGTAGATACAGAATAGCTGCTTCTGCACCAACATCTAATAACGATGAAGGTGACTTATACTTCGACACTGCTGCTAATAAAATGTTTGTGTACGATGGTTCCGCATGGGGTCAGGTTACATCAACAGGTGAATTTAAAATATTAGGTATTAAAGATAACGGACAAGCACACAATGGTAGCGGTCCAACATTTAATGGTAGTAACGATAGATTTGATTTATTTGAAAATGCAAGTGCTGCTGATATTAGTCAAGCATCTCAATTACTTGTAGTTTTAAATGGTGTTATTCAAAAACCTAATGATGGTAGTTTCAGTGGTACTGAAGAAGGATATTATCTAGATGGTACAGACGGAATAAGATTCTGTGACCCACCAGCTAGTGGTTCAACTTTATTTATAACTAAACAAGGTTCAGCTACACAGATAAATACACCAGCTGATAACACAATAACTCAGGCAAAGATAGCCGTAGATGCAGTAGACGAACAAAGACTACAGGTAAGTAATGCTCCTACAAATGGATATTATTTACAAGCTCAATCTGGAAACACAGGCGGATTAACTTGGGCTGCTGTACCTAATCCTGATTTAACTCAGTTAAGTGCAAGCAACCTAACATCTGGAACTATTCCTGATGCAAGATTTCCTTCGACTTTACCAGCAGTAAGTGGAGCTAACTTAACAGGTTTACCTCCTAGTTGTACTGGTGGAGGAAGTGATGAAATTTTCTGGGAGAACGGACAAACAGTTACTACTAACTACACCATTACTAATAACAAGAATGCTATGTCCGCTGGACCTATAACAATTAATAATGGTATCGCCGTAACAATCGGTACTGGAGAAAACTGGACAATCGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a4e2ab6ea4d9874a54629d667d967617a24a230cd2985713e844ee8a345042ee
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6531
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50