Protein

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Genbank accession
YP_009273585.1 [GenBank]
Protein name
head decoration
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,86
Protein sequence
MSAIRYGKRIDLQGNQILNAVVHSDAGLPTPTAALTGSLRYNTSDSRLYVCNGTTWELRATNADALQGFSPAQLRDRGTHTGTQDVATISGLDAKIDSRPVSNFAAATKDVSLGNFKITNLANGVSNNDAINVSQLDAVRQIAMSAAVGTAIKAPVLAVAITNQNLAAVGTIDGVTIPTSGRFLLAGQTDSTQNGIYYKNGGGAAIRATDADETGELLPGTQVFVTQGTANGDSSWAIVSDAPITIGASAQQWAKVPGSSGTSYTWGNGLQNSAGTISVKAGVGINVSDGNVNIDTALVVRKSAQAVPGGTSPVTITHGLNTSDIIQVQLREVATGDLVFVGVTVTGANTISLDFDAATVPAGTYRVAVAG
Physico‐chemical
properties
protein length:371 AA
molecular weight: 37831,64930 Da
isoelectric point:5,34294
aromaticity:0,04852
hydropathy:0,04151

Domains

Domains [InterPro]
DC_1609
STR
2–371
DC_1609
IPR011049
STR
24–141
IPR011049
IPR011049
STR
52–141
IPR011049
IPR008635
RBD
117–149
IPR008635
YP_009273585.1
1 371
Architecture
STR
STR 2-371
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009273585.1
1 371
Domain Start End Length (AA) Confidence
N-terminal 1 291 291 0,9346
Central domain 292 360 70 0,0077
C-terminal 361 371 10 0,9961
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-291
Central
292-360
C-terminal
361-371

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage GMA6
[NCBI] 		1647285 Uroviricota > Caudoviricetes > Bendigovirus >
Host Gordonia malaquae
[NCBI] 		410332 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Mycobacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009273585.1 [NCBI]
Genbank nucleotide accession
NC_030906 [NCBI]
CDS location
range 75571 -> 76686
strand +
CDS
ATGAGTGCAATCCGGTACGGAAAGCGCATTGATCTTCAGGGGAACCAGATTCTCAACGCGGTAGTCCATTCGGACGCCGGTCTGCCGACCCCGACAGCCGCCCTCACGGGTTCATTGCGGTACAACACGTCCGACAGCCGCCTCTACGTCTGCAACGGCACGACGTGGGAACTGAGGGCCACTAACGCCGATGCCCTTCAGGGATTCAGCCCCGCACAACTCCGTGACCGTGGAACGCACACCGGCACGCAGGACGTGGCAACGATCAGCGGACTCGACGCCAAGATCGATAGTCGTCCGGTCTCGAACTTCGCCGCAGCCACCAAGGACGTGTCGCTCGGCAACTTCAAGATCACGAATCTTGCAAACGGTGTGAGCAACAACGACGCCATCAACGTCAGTCAGCTCGACGCAGTTCGTCAGATCGCGATGAGTGCGGCAGTCGGCACCGCGATCAAGGCACCGGTTCTGGCCGTGGCGATCACCAACCAGAACCTCGCAGCGGTGGGCACCATCGACGGCGTGACCATCCCGACCTCGGGCCGATTCCTGTTGGCTGGACAGACTGACTCGACGCAGAACGGCATCTACTACAAGAACGGCGGTGGAGCGGCCATCCGTGCCACGGACGCCGACGAGACGGGTGAACTCCTGCCCGGTACGCAGGTGTTCGTCACGCAGGGCACCGCGAACGGGGACTCGTCGTGGGCCATCGTGTCGGATGCACCCATCACCATCGGAGCATCGGCACAGCAGTGGGCCAAGGTGCCGGGTTCCTCGGGCACTTCGTACACGTGGGGTAACGGCCTACAGAACAGTGCAGGCACCATCTCGGTCAAGGCCGGTGTGGGCATCAACGTCTCGGACGGCAACGTCAACATCGACACCGCCCTCGTGGTCCGCAAGTCGGCACAGGCGGTACCGGGAGGCACTAGCCCCGTCACGATCACCCACGGGCTGAACACGAGCGACATCATTCAGGTGCAGCTCCGTGAAGTCGCGACTGGCGATCTCGTGTTCGTCGGCGTTACAGTCACCGGAGCGAATACCATTTCGCTCGACTTCGATGCGGCGACGGTCCCTGCTGGCACCTACCGCGTTGCGGTCGCCGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
57bd87a99138128018593a46256eddd10c35a6880a551849973a5ac420669ce3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8182
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50