Protein

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Genbank accession
YAA53414.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNELFSQGGRGSTGILTNKQAVARHFGVKQSEVVYFSVGALLTGYKVIYDKASQRAYSLPADIGSGVTAVSLSPAGVLVHSAGSVDLGALAVAREEYVTLPGSFATGVTVNTKNELVVFTDGKYRWDGALPKEVPADSTPETSGGVGLGAWVSVGDAVLRGQISDPEGATKYPELQMARWRDNGDPRGWGAVGDGVADDTLAVQACFDATTGDIDLGGKTYLVRKNPALASTYPTEPDFSDGTRNYSPCLALVNKEGIRISNGTIIVNTHGLDGLALVNCRNVTVSVTVRGPNKFPAIDAPTGYAEKGESRFGYNTAGGVNVLGPNNSVDTSSYNTGAFNEVSGQFPSYDSAGNPTGSYQSSWGTFLGGYIGSWSCGVKIQRACKNITVERCKISGFNYAGVGIGIRNIASPDMADYPNESDVPEGIIISKNTITNCYSNGIGVLCGYKMGYFDNVISNIGHPNGADDLNASFDPGYGIGHGRNRRIRNITASRNFVFNCRRKCIDFHGGGQLIITDNFCLEHGVVGIYAKCGSGWHPNYEPYNLIISNNYVRSRDIPDSTSTGPLAGGRYTRSIDVGGGGEATAATYPNPFVKIHNNYCELRAFEGVAISTGGGDSAYQVYQDIDVSHNTVVLKCLTASNKAEGVMINAGTNATEVYRGQTVKLVGNSIKQLNTLNLNYRSPGYRIGGIPKSLIAHANTLDMNVQLQASMLCDFVLNDQTNFSFQGNQVLSTGQRSTCTLQECMFYENTKIFRAAGSGSLSIPGTLGRGVWQLVIAGTGNAFGSKQTQFASTGSGGTGADIVRNPTTGFIADFAIGVSGLTVPEVTQDSTVQIQLKQLMQLDFVF
Physico‐chemical
properties
protein length:846 AA
molecular weight: 89670,18900 Da
isoelectric point:6,16887
aromaticity:0,08865
hydropathy:-0,16868

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–96
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR012334 IPR006626 IPR006626
DC_1596
STR
1–344
DC_1596 IPR006626 IPR006626 DC_0622
IPR040775
RBD
91–156
IPR040775 IPR011050
IPR006626
Unmapped
255–279
IPR006626
YAA53414.1
1 846
Architecture
ATT
STR
RBD
ATT 1-165 | STR 166-538 | RBD 555-846
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YAA53414.1
1 846
Domain Start End Length (AA) Confidence
N-terminal 1 198 198 0,9905
Central domain 199 730 533 0,9941
C-terminal 731 846 115 0,9680
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-198
Central
199-730
C-terminal
731-846

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage GR6
[NCBI] 		3446680 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAA53414.1 [NCBI]
Genbank nucleotide accession
PV805636 [NCBI]
CDS location
range 59868 -> 62408
strand -
CDS
ATGAACGAATTATTCTCACAAGGTGGAAGAGGATCAACCGGAATATTAACCAACAAACAAGCAGTAGCCCGTCACTTTGGGGTTAAACAATCGGAAGTTGTTTACTTCTCAGTGGGTGCTCTGCTTACTGGTTACAAAGTCATTTATGACAAAGCGTCACAGCGTGCTTATTCCTTACCTGCTGATATTGGTTCAGGGGTTACTGCTGTAAGTCTTAGCCCTGCTGGAGTATTAGTTCATTCTGCTGGTAGTGTGGACTTAGGTGCACTGGCTGTTGCTCGTGAAGAGTATGTAACCCTACCTGGTTCATTTGCTACTGGTGTAACAGTTAATACTAAGAATGAACTGGTTGTATTCACTGATGGTAAGTACCGTTGGGATGGAGCATTACCTAAAGAGGTTCCTGCTGATTCAACCCCCGAAACTTCTGGTGGCGTTGGTCTGGGTGCTTGGGTGAGTGTTGGGGATGCGGTACTACGAGGACAGATTTCAGACCCTGAAGGTGCAACAAAATACCCCGAACTACAAATGGCTCGCTGGCGTGATAATGGCGATCCACGTGGATGGGGGGCGGTTGGTGATGGCGTTGCCGACGATACGTTGGCAGTGCAGGCATGTTTCGACGCCACCACTGGAGATATTGATTTAGGCGGGAAGACGTATTTAGTTCGAAAAAATCCTGCACTGGCTTCTACGTACCCTACTGAGCCTGACTTCAGCGACGGTACACGTAACTACAGTCCGTGTCTGGCACTGGTAAATAAGGAAGGTATTCGTATCTCCAACGGCACTATAATTGTGAATACGCACGGACTGGATGGGCTTGCCCTTGTAAATTGCCGGAACGTGACTGTGTCTGTAACAGTGCGTGGCCCTAACAAGTTCCCTGCTATAGATGCGCCTACTGGTTATGCAGAGAAAGGAGAATCTCGATTTGGCTACAATACAGCCGGTGGAGTTAATGTGTTGGGACCAAATAACTCAGTTGATACCTCTAGTTATAACACAGGGGCATTTAATGAGGTGTCCGGACAATTCCCATCCTATGACAGTGCGGGTAATCCAACAGGAAGCTACCAAAGCAGTTGGGGTACTTTTCTTGGCGGGTATATTGGCAGCTGGAGTTGCGGTGTTAAGATTCAAAGAGCTTGTAAAAATATAACCGTTGAAAGGTGTAAGATATCTGGCTTTAACTATGCAGGTGTTGGGATTGGCATAAGAAATATTGCCTCACCGGACATGGCGGACTACCCAAATGAAAGCGATGTTCCAGAAGGTATTATTATTTCAAAGAACACAATAACCAACTGTTACTCAAACGGTATAGGTGTTCTGTGTGGCTACAAAATGGGCTACTTTGATAATGTAATTAGCAACATCGGACACCCGAACGGTGCTGATGATTTGAATGCATCCTTTGACCCTGGCTATGGCATCGGACATGGTAGAAACAGGAGAATACGCAACATAACAGCCAGCCGCAATTTCGTTTTTAACTGCCGTAGAAAATGCATCGATTTTCACGGTGGGGGTCAGTTAATTATCACTGATAACTTCTGCCTGGAGCATGGCGTAGTCGGTATCTACGCTAAATGTGGTTCAGGCTGGCACCCAAACTATGAACCATATAACCTCATAATCTCTAACAACTATGTGCGCTCCAGGGATATTCCGGATAGTACCAGTACCGGTCCGCTTGCGGGCGGCAGGTACACCCGCAGCATCGATGTAGGTGGGGGTGGGGAGGCTACGGCAGCGACGTATCCGAACCCCTTTGTTAAGATTCACAACAACTATTGCGAGCTTAGAGCTTTTGAAGGGGTAGCTATATCAACTGGAGGTGGCGATAGCGCATACCAGGTGTACCAGGATATTGACGTAAGTCATAATACTGTAGTGCTTAAGTGCTTAACCGCCAGCAATAAAGCAGAAGGTGTCATGATTAACGCCGGCACCAACGCAACTGAAGTATATCGTGGGCAAACCGTTAAGCTGGTGGGTAACAGTATTAAGCAACTGAACACGCTGAACCTGAACTACCGCTCCCCCGGTTATCGTATTGGAGGCATTCCTAAGTCCCTGATTGCACATGCCAACACTCTGGATATGAACGTGCAGTTGCAAGCATCCATGCTCTGCGACTTCGTTCTGAATGACCAGACTAACTTTAGCTTCCAGGGTAATCAGGTACTGAGTACCGGGCAGAGAAGTACCTGCACGTTGCAAGAGTGTATGTTCTATGAGAATACCAAGATATTCCGTGCTGCTGGTTCAGGTAGCTTGAGTATTCCAGGTACGCTCGGCAGGGGTGTATGGCAACTAGTTATTGCAGGTACAGGTAATGCTTTTGGTTCTAAGCAGACTCAGTTTGCAAGTACAGGTTCTGGGGGTACTGGGGCGGATATAGTAAGGAATCCTACTACCGGGTTCATTGCGGACTTTGCAATCGGTGTTTCTGGCTTAACTGTTCCGGAAGTAACCCAGGATAGTACCGTGCAGATTCAGTTGAAGCAGCTTATGCAACTGGATTTTGTGTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
28114b1585d2a393c281e6c512bb2aadb60b634fbff8882c293462a04688c9b7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8338
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50