Protein

View in Explore
Genbank accession
QRG24131.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MVTETFTPGEDFVVPIGVDTITVELEGTKGQVINNSNQQIFESGDGGRVAGDLSVSPGETLYIRSSPGGASDGQNGGDSIDIRRGGTALSDRIAVAAGGGGGGIYGELDEFYPYDDFLGGDGGADTGEDGQYGSDAGEGGTQSSGGAGGTDSSAGNDGEFGSGGDHPGESNDIGAGGGGAGWYGGGAGSSNVTSTGTNESDGGGGGSNYDDGLDTVTANERGTSSRSYSQGGLVTITYEVAPVAPGASAAYVADDQIDVSISEDASAGDPDNFEVEMRRDEGSWQTPAGGPSSTSTAGTYSYGPSSDSGYGEQIGIDSKFEFRVRAVNDAGPSDWTYTDPVRTRPLSPHDPSINRPDGDTLVIEYTDNSDVADKTAVFYRKDSGSGYGSWQYTDAISTGAVSKGAQRSLTVSVGDAAWFERDARYQFRLRHEHVSSGLDSGFVYADYGNEGNVYFADDFESGDLSAWDSTTGVVATGDASHPNAADTGINGPDSGSYFATFDAEGFVEKSLGDLTGETSVLVRCALATGSMDNASEYTEIQWYDGSSWNTVERLDHSYNEQGWVEVHEIIPDSWLSADSRVRVLGVGGLGGGDQHAVDRFVVSDVLHEYTTPATPSNLSLDASTGREITATWSLSASVAAKADVRDTETWFGPTGDSLTGVNRDSGMETYTFTNLLDGERYRVEVNDSIIQHRRGSPGVEIDSERAAGEATTNLPAPTALTVSGVTADSADVLFEDNANNKAGYRAYSGPVSSFEAQGDFDAWTEQKGFQRVDDESYFGDWSAYAQRPSGDSDSQPRASRVYHDGGEQIRAFEFYWRETENSYGGGVRLKNSNGDYELGVATDNPAWVIDDANGQREPATGEGGYSHWVRFLVVFDWSAGTFSVDFESYGPDEATYSESDIPLKQGVDVETVELWNYHVVGGWGDGALEMWWDGISTYTQNGGDLPPQYSLNYTNGYTKADTNISNARGGFSIAVRFALDGTANSKQSLVGAGQHLLQIEDLSSGGSYRAWSHTNGPSESALPSSDFVSGDVHEVVWTYDYGTDTGDFYHDGEKIKTYTENHLDDIEQIGTVETGSWSDGERRLQGKIDTVRIYDRKLSDAEALDVLGASPPTAGLLIKYDYDGGPSNTSLEDKSPNGWDGDFANSPEWAPPLSRVKKTLSDLKNGEAYVTRASIFTDDTEVFDE
Physico‐chemical
properties
protein length:1185 AA
molecular weight: 125819,37820 Da
isoelectric point:4,15575
aromaticity:0,10127
hydropathy:-0,59671

Domains

Domains [InterPro]
DC_0450
STR
2–452
DC_0450 G3DSA:2.60.120.200
IPR013783
STR
229–350
IPR013783 IPR013320
IPR036116
STR
318–685
IPR036116 PF13385
QRG24131.1
1 1185
Architecture
STR
STR
STR 2-685 | STR 948-1145 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Halorubrum virus Humcor1
[NCBI] 		2809244 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Halorubrum coriense
[NCBI] 		64713 cellular organisms > Archaea > Methanobacteriati > Methanobacteriota > Stenosarchaea group > Halobacteria

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QRG24131.1 [NCBI]
Genbank nucleotide accession
MW344765.1 [NCBI]
CDS location
range 15192 -> 18749
strand +
CDS
ATGGTCACTGAGACGTTCACTCCTGGTGAGGACTTCGTTGTGCCGATCGGTGTCGATACCATTACAGTCGAGCTCGAGGGCACAAAGGGCCAGGTAATAAACAACTCTAATCAACAGATCTTCGAGTCCGGAGACGGCGGGCGCGTAGCGGGAGATCTATCTGTCTCGCCCGGCGAAACGCTGTATATACGCAGCAGCCCGGGCGGCGCGAGCGACGGGCAGAACGGCGGCGACTCTATCGACATTCGCAGGGGCGGCACCGCGCTCAGTGACCGTATCGCCGTCGCGGCAGGCGGCGGCGGAGGCGGCATATACGGAGAACTTGATGAGTTCTACCCGTACGACGACTTTCTCGGCGGCGACGGCGGCGCAGATACTGGCGAAGACGGCCAGTACGGAAGCGACGCCGGGGAGGGCGGCACGCAGTCATCAGGCGGCGCGGGCGGGACAGACAGTTCAGCCGGTAACGACGGCGAATTCGGTTCCGGCGGCGACCACCCCGGTGAATCTAACGACATAGGCGCCGGCGGCGGCGGCGCCGGCTGGTACGGCGGCGGCGCGGGGAGCTCGAACGTCACCAGCACAGGGACAAACGAATCGGACGGCGGCGGGGGCGGCTCGAACTACGATGACGGTCTCGATACCGTCACTGCGAACGAGCGCGGCACCTCCTCCCGCTCCTACTCGCAGGGTGGGCTCGTCACCATCACCTACGAGGTGGCGCCGGTCGCGCCGGGCGCGTCGGCCGCGTACGTCGCCGACGACCAGATCGACGTGAGCATATCCGAGGACGCGTCGGCGGGCGACCCCGATAACTTCGAGGTAGAGATGCGGCGCGATGAAGGATCGTGGCAGACGCCCGCCGGCGGTCCGTCGTCGACGTCCACTGCTGGGACGTACAGCTACGGTCCGAGCTCGGACAGTGGCTACGGCGAGCAGATTGGGATCGACTCGAAGTTTGAGTTTCGAGTTCGGGCCGTCAACGACGCCGGGCCGTCCGACTGGACGTACACTGATCCGGTTCGCACGCGACCCCTCTCGCCGCACGACCCGAGTATCAACCGCCCGGACGGCGACACCCTTGTCATCGAATACACAGATAATAGCGACGTCGCAGACAAGACTGCCGTTTTCTACAGGAAGGACAGCGGGTCAGGCTACGGCTCATGGCAGTACACCGATGCGATTAGCACCGGCGCGGTCTCGAAGGGTGCTCAGCGGTCTCTGACCGTGTCCGTTGGCGACGCAGCGTGGTTCGAGCGGGATGCTCGATACCAATTCCGTCTACGCCACGAACACGTCTCCTCGGGGCTCGACTCGGGCTTCGTGTACGCTGATTACGGCAACGAGGGGAACGTCTACTTCGCAGACGACTTCGAGAGCGGCGACCTGTCGGCGTGGGATAGTACAACCGGGGTCGTTGCGACGGGGGACGCGTCGCACCCTAACGCCGCAGACACGGGAATCAACGGACCCGACAGCGGTTCCTATTTTGCGACCTTCGACGCGGAGGGTTTCGTCGAAAAGAGCCTCGGCGACCTGACCGGGGAGACGAGCGTACTCGTACGGTGCGCGCTCGCCACCGGCTCGATGGACAACGCGTCTGAGTACACCGAGATCCAGTGGTACGACGGGTCTTCGTGGAATACTGTAGAACGGTTGGACCATTCGTACAACGAGCAGGGCTGGGTCGAGGTCCACGAGATCATCCCCGACTCGTGGCTGTCGGCGGACAGCCGCGTCAGGGTCCTCGGCGTCGGCGGCCTCGGAGGCGGAGATCAGCACGCTGTCGACCGATTCGTCGTCTCCGACGTGCTCCACGAATATACGACACCCGCCACCCCATCTAACCTGTCGCTCGACGCCTCTACAGGACGCGAGATTACGGCGACGTGGTCGTTGAGCGCGTCGGTCGCGGCGAAGGCGGACGTGCGAGACACCGAAACGTGGTTCGGGCCAACTGGTGACTCGCTCACCGGGGTAAACCGCGACAGCGGCATGGAGACCTACACGTTCACGAATCTCCTCGACGGTGAGCGGTATCGGGTGGAAGTCAACGACTCAATCATCCAGCATCGGCGCGGCTCGCCGGGCGTAGAGATCGACAGCGAGCGGGCCGCGGGCGAGGCGACGACGAACCTCCCGGCGCCGACAGCACTCACCGTGTCGGGCGTGACCGCTGACAGCGCGGACGTGCTGTTCGAGGACAACGCCAACAACAAGGCGGGGTACCGCGCGTATTCGGGACCGGTTTCCAGCTTCGAGGCGCAGGGCGACTTCGACGCGTGGACCGAACAGAAGGGCTTCCAGCGCGTCGACGACGAGTCGTACTTCGGTGACTGGAGCGCGTACGCTCAGAGGCCGAGCGGTGATTCCGACAGCCAACCCCGAGCCAGCCGTGTATATCACGACGGCGGCGAACAGATCAGAGCGTTCGAGTTCTATTGGCGTGAAACGGAGAACAGCTACGGAGGCGGCGTCCGGCTCAAAAACAGCAACGGTGACTACGAACTCGGCGTGGCTACTGATAATCCTGCGTGGGTCATTGACGACGCGAACGGACAGCGAGAACCCGCAACCGGTGAAGGCGGATACAGCCACTGGGTCCGTTTCCTCGTCGTGTTCGACTGGTCGGCTGGGACGTTCAGCGTCGACTTCGAGAGCTACGGGCCAGACGAGGCCACCTACTCGGAGTCGGACATACCGCTCAAACAGGGCGTCGACGTGGAGACGGTGGAGTTGTGGAACTACCACGTTGTTGGCGGGTGGGGTGACGGCGCGCTCGAAATGTGGTGGGACGGCATCTCGACCTACACGCAAAACGGGGGCGACCTCCCGCCGCAGTACTCGCTCAACTATACGAACGGGTACACTAAAGCGGACACTAACATATCCAACGCGCGGGGTGGTTTCTCCATTGCCGTCAGGTTTGCTTTAGACGGGACGGCTAACTCTAAGCAATCGCTCGTCGGCGCGGGGCAGCACCTCCTCCAAATAGAGGATCTGTCGAGCGGCGGCAGTTACCGCGCATGGAGCCACACAAACGGGCCGTCTGAGAGCGCGCTCCCCTCGAGCGACTTCGTGTCAGGGGATGTTCACGAGGTGGTTTGGACATACGACTACGGGACCGACACCGGCGACTTCTACCACGACGGAGAGAAGATCAAAACGTACACTGAGAACCACTTAGACGATATTGAGCAAATCGGCACGGTTGAGACAGGCTCTTGGAGCGACGGCGAAAGGAGGCTTCAGGGCAAAATCGACACGGTGAGGATCTACGACAGAAAACTGTCCGACGCAGAAGCGTTAGACGTGTTAGGGGCATCCCCGCCTACCGCCGGGCTGCTGATAAAGTACGACTACGACGGCGGCCCGAGTAACACATCTCTGGAAGACAAATCGCCTAACGGGTGGGATGGAGACTTCGCCAACAGCCCGGAATGGGCGCCGCCGCTCTCGCGAGTCAAAAAGACCCTCTCCGACCTCAAGAACGGCGAGGCGTACGTCACCCGCGCGAGTATCTTCACTGATGACACGGAGGTGTTCGACGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
29b04b8734a180e3d484ab4209b0afee690e4c95b5d1f391196a96648554d987
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8160
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Novel Halovirus Hardycor1, and the Presence of Active (Induced) Proviruses in Four Haloarchaea Dyall-Smith,M., Pfeiffer,F., Chiang,P.W. and Tang,S.L. 2021 33498646 GenBank