Protein

View in Explore
Genbank accession
YP_009999821.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MPKKVGPNQGLPYGWIRGEDYWGGPMSDSQVFLDTMLFPVIKSLTFSSPPAQAVDGDTYSIAANPTGAWSGHAGEVAVYVENAWQFYPPKKGWRAYVESFDKMMWFNGTTWVNESDGQDPVNPDPDPSIKPKWYDIAVTVSDSMYANEPILHLPITDPMVLQANMAGSIFDMADAASEAYYQFRVQRNGQNIATITVEQGQFNATFTTSGGNPVAFGAGDRLTVRAQAERVVSMKNFGFVIRMGLS
Physico‐chemical
properties
protein length:246 AA
molecular weight: 27074,11520 Da
isoelectric point:4,71203
aromaticity:0,12602
hydropathy:-0,28008

Domains

Domains [InterPro]
DC_0494
STR
1–245
DC_0494
IPR021251
STR
32–112
IPR021251
YP_009999821.1
1 246
Architecture
STR
STR 1-245 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Providencia phage vB_PreS-PibeRecoleta
[NCBI] 		2761109 Uroviricota > Caudoviricetes > Casjensviridae > Redjacvirus piberecoleta >
Host Providencia rettgeri
[NCBI] 		587 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009999821.1 [NCBI]
Genbank nucleotide accession
NC_053009.1 [NCBI]
CDS location
range 32838 -> 33578
strand +
CDS
ATGCCTAAAAAAGTTGGCCCCAATCAGGGGCTACCTTATGGCTGGATTAGAGGGGAAGACTATTGGGGTGGCCCAATGTCTGACTCTCAGGTGTTTCTCGACACCATGCTATTTCCGGTTATAAAGTCTCTCACATTCTCTTCGCCACCAGCTCAAGCGGTTGACGGCGATACATATTCAATCGCAGCAAACCCGACAGGCGCTTGGTCAGGTCATGCAGGGGAAGTCGCGGTTTACGTTGAAAATGCGTGGCAGTTCTACCCGCCTAAGAAAGGCTGGCGCGCATACGTCGAATCATTCGATAAGATGATGTGGTTTAACGGAACAACGTGGGTTAATGAATCGGATGGCCAAGATCCAGTTAACCCCGACCCAGACCCATCGATTAAGCCAAAGTGGTACGATATTGCGGTGACAGTGTCAGACTCGATGTACGCGAATGAACCTATTTTGCATTTGCCGATTACCGATCCGATGGTATTGCAGGCGAACATGGCGGGCTCTATATTCGATATGGCCGATGCAGCCAGTGAAGCGTATTACCAATTCAGGGTGCAGCGCAATGGCCAGAACATCGCTACAATCACAGTCGAGCAAGGGCAATTCAACGCAACATTTACCACGTCAGGCGGAAACCCCGTAGCGTTCGGGGCAGGCGATCGCTTGACCGTTCGAGCGCAGGCGGAGCGAGTCGTATCCATGAAGAACTTTGGATTCGTTATCCGCATGGGCTTGTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
31a60e0bfb2240507fef86614742b0726457cbd7d1b987f3de627052a61ced52
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8692
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of Providencia rettgeri bacteriophages PibeRecoleta, Stilesk and PatoteraRojo Batinovic,S., Chan,H.T., Stiles,J. and Petrovski,S. 2023-09-01 — GenBank