Protein

View in Explore
Genbank accession
QAX96480.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MRSFSKKFGRGPASQISKGTKSAGFRADGALLVTGSVVNTPITLPYAANVELSLADSDTQHLELAGDVHITAPELRVGGSWKIYIRQDATGGHDVTFGANLKNIYGTPVLSAANATTLMTLIGRGDGNFDYTLTAVATI
Physico‐chemical
properties
protein length:139 AA
molecular weight: 14541,25260 Da
isoelectric point:8,04406
aromaticity:0,07194
hydropathy:0,00576

Domains

Domains [InterPro]
DC_0931
RBD
8–139
DC_0931
IPR058970
RBD
62–127
IPR058970
QAX96480.1
1 139
Architecture
RBD
RBD 8-139
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VmeM-Yong XC32
[NCBI] 		2500767 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio mediterranei
[NCBI] 		689 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QAX96480.1 [NCBI]
Genbank nucleotide accession
MK308675.1 [NCBI]
CDS location
range 172842 -> 173261
strand +
CDS
ATGCGTTCATTTTCTAAGAAATTTGGACGCGGCCCTGCCTCTCAAATCAGTAAAGGCACCAAGAGCGCGGGTTTCCGCGCCGATGGTGCGCTCCTGGTCACAGGCAGTGTCGTAAACACCCCTATCACTTTGCCCTATGCTGCAAACGTGGAGCTATCCTTAGCAGATAGCGATACGCAGCATCTAGAACTAGCTGGCGATGTGCATATTACTGCGCCGGAGCTAAGAGTAGGTGGGTCCTGGAAAATCTATATAAGGCAAGATGCGACAGGCGGACACGATGTAACCTTCGGGGCTAACCTAAAGAACATCTATGGTACACCGGTGTTGTCTGCCGCAAACGCGACGACGTTAATGACCCTAATCGGTCGAGGGGATGGTAATTTTGATTACACCCTAACGGCCGTTGCCACGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ded5df9938fd3749eba80717e8e0284df5f5a768204f093e6d3bb47114e6c79b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7906
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50