Protein

View in Explore
UniProt accession
A0A143FIP5 [UniProt]
Protein name
Polygalacturonase
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MINVKDFSGLTPAIQIQNAINAAALATSPSKTVLLEEKDYYLESSLTLLNDVELLFGYRSRLVIGGNFPVLLIGRNASVTNPFIAIDSPNFDSLVFSFDGKNKYYNTWNKTAIKDGVVVNWTGSHKGVGIRLFSGGTDHEISFVDISNVKLVGLRKGIELEAKAPTTGMAWVNANRFNNISIEDCVEMITIDSSETIPNECSGNIFSGLQLQPSTATTKVLKVSGQHNRFDGMLWDISLIPTSKFVDITANSSYTKIDFNRSLPSTKVQDSGASTILL
Physico‐chemical
properties
protein length:278 AA
molecular weight: 30324,09020 Da
isoelectric point:5,66340
aromaticity:0,08633
hydropathy:-0,00863

Domains

Domains [InterPro]
IPR011050
STR
3–204
IPR011050 DC_0399
IPR012334
STR
3–272
IPR012334
A0A143FIP5
1 278
Architecture
STR
STR 3-278
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A143FIP5
1 278
Domain Start End Length (AA) Confidence
N-terminal 1 12 12 0,9152
Central domain 13 267 256 0,9903
C-terminal 268 278 10 0,2789
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-12
Central
13-267
C-terminal
268-278

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage Vinny
[NCBI] 		1805955 Uroviricota > Caudoviricetes > Herelleviridae > Bastillevirus > Bastillevirus evoli
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
0b48a7a8ad871395c39bd1eb8111c694cb416a10e489d37741cafd4c132587d2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9000
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50