Protein

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Genbank accession
YP_009800829.1 [GenBank]
Protein name
major tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,64
Protein sequence
MHLPNGAQIFVETSRGVEIEATAITNADNPVATVASKGDLVKGDYVIVTQSTWAKMVSRVLIVTDAQETSITLAGIDTSDTLVFPTGGTMSFAKITGWTEIPCVQEIGQDGGEQQYYTYQCLSDDKEQQIPTFKSAVSLTYTFAHEFDNPIYPILRKLDSSGQVTAVRMYVPKASEMRMWAGILSFNDIPSTQVNEMETVELAVSLKGDFTFVSSTLASPGA
Physico‐chemical
properties
protein length:222 AA
molecular weight: 24111,94020 Da
isoelectric point:4,46825
aromaticity:0,08559
hydropathy:-0,03153

Domains

Domains [InterPro]
DC_0037
ATT
1–50
DC_0037 IPR014918
YP_009800829.1
1 222
Architecture
ATT
TAS
ATT 1-50 | TAS 51-214 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009800829.1
1 222
Domain Start End Length (AA) Confidence
N-terminal 1 214 214 0,6390
Central domain 215 214 1 0,0432
C-terminal 215 222 7 0,9854
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-214
Central
215-214
C-terminal
215-222

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacteria phage vB_EcoS_IME18
[NCBI] 		2163886 Uroviricota > Caudoviricetes > Drexlerviridae > Tunavirus > Tunavirus IME18
Host Escherichia coli BL21(DE3)
[NCBI] 		469008 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009800829.1 [NCBI]
Genbank nucleotide accession
NC_047959 [NCBI]
CDS location
range 46030 -> 46698
strand -
CDS
ATGCACTTACCAAATGGCGCGCAAATTTTCGTGGAAACCTCTCGCGGAGTAGAGATTGAGGCGACCGCTATCACTAATGCAGATAATCCTGTTGCTACAGTTGCATCTAAAGGTGACTTAGTAAAAGGCGATTACGTTATTGTAACTCAGTCAACTTGGGCTAAGATGGTTAGTCGAGTGCTAATTGTTACTGACGCTCAAGAAACAAGCATCACTCTTGCTGGAATTGACACCTCTGATACTCTTGTTTTCCCGACTGGCGGTACAATGAGCTTTGCAAAAATTACTGGCTGGACTGAGATTCCTTGCGTACAGGAGATTGGTCAGGACGGCGGCGAGCAGCAGTATTACACTTATCAGTGTTTGTCCGACGATAAAGAGCAGCAGATCCCAACGTTTAAATCTGCGGTATCGCTAACGTACACTTTCGCGCACGAATTTGATAACCCGATCTACCCGATTCTGCGCAAGCTGGATTCGTCTGGCCAGGTAACAGCGGTTCGAATGTACGTGCCGAAAGCGAGCGAAATGCGTATGTGGGCTGGCATCTTGTCGTTTAACGATATCCCATCCACGCAGGTTAACGAAATGGAAACGGTGGAACTCGCCGTATCCCTGAAAGGTGACTTTACTTTCGTCTCATCAACTCTGGCATCTCCAGGTGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2e145e130b71eeecfff10cf52352286dea280658c05d7b848f7609ccb339dcba
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9559
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of Enterobacteria phage IME18 Li,P., Wang,J. and Tong,Y. 2016-02-25 — GenBank