Protein

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Genbank accession
YP_010081799.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAEITKARTLTYDGEEVYARSHIDVVDGLDKSKLLTDEQKQKLENFNADAIDVATPSKNGLMSAQDKTKLDSLNQFNPDTLTNATTQKAGLMSAEDKRRLDELKTNSNAYDKGLSNATASSSVIAANINKWPNATQTVNLSKKVSECQNGIVLVWRSDTEDDNYHYQYVPKYHVSAHSTTKIVHLIPTNSANEFCTKTVIVKDNVVNGTNDNHNRTTKANKVRLHEILEF
Physico‐chemical
properties
protein length:230 AA
molecular weight: 25631,20320 Da
isoelectric point:6,38310
aromaticity:0,05652
hydropathy:-0,69478

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage SP197
[NCBI] 		2495554 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus pseudintermedius
[NCBI] 		283734 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010081799.1 [NCBI]
Genbank nucleotide accession
NC_055022.1 [NCBI]
CDS location
range 24304 -> 24996
strand +
CDS
ATGGCTGAAATTACTAAGGCAAGGACGTTAACATACGATGGCGAAGAGGTTTATGCTAGATCGCACATTGATGTTGTTGACGGTTTAGATAAATCAAAGTTATTAACTGACGAGCAAAAACAAAAACTAGAAAACTTTAATGCGGATGCAATTGATGTTGCAACGCCATCGAAAAATGGTTTGATGTCCGCGCAAGACAAAACTAAACTGGACAGCTTAAACCAGTTCAACCCTGATACACTCACAAATGCGACTACTCAAAAAGCGGGCTTAATGTCCGCTGAAGATAAGCGTCGCCTTGATGAGTTGAAAACAAATTCAAACGCTTACGATAAAGGGTTATCAAATGCAACTGCATCCAGTTCAGTTATTGCAGCAAACATCAACAAATGGCCAAACGCAACTCAAACTGTAAATTTAAGTAAAAAAGTGAGCGAATGCCAAAATGGCATTGTGTTGGTATGGCGTTCTGACACTGAAGATGATAACTACCATTATCAATATGTACCTAAGTATCACGTGTCGGCTCATAGTACAACAAAAATTGTGCATCTAATCCCTACAAATTCCGCGAATGAATTTTGTACAAAAACAGTCATAGTAAAAGATAATGTCGTTAATGGTACGAATGACAACCATAATAGGACAACCAAAGCAAACAAAGTACGCTTACATGAAATTTTAGAATTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
90aac5a08ea053b599f0369137c8ff06776f11e893abf7ed45ebf2cc93d2e47d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8242
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome of Staphylococcus phage SP197 Azam,A.H., Arai,H., Miyanaga,K. and Tanji,Y. 2019-04-17 — GenBank