Protein

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Genbank accession
YP_214257.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAATVYNGVLQGTGAIHTQVLYTNSTGKNVRIVWNYFGVGNTHPSELGIAVGPSSNPNHNGGQDLDTMYLSSQANFAAGKYLAVQRNDDNTSNNAYGSYGGSFPTELMILNGSKISILIPAQIGSNTNALTYNFVAITED
Physico‐chemical
properties
protein length:140 AA
molecular weight: 14823,17800 Da
isoelectric point:5,39632
aromaticity:0,09286
hydropathy:-0,19786

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_214257.1
1 140
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0014
Central domain 11 129 120 0,0005
C-terminal 130 140 10 0,9978
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-129
C-terminal
130-140

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-SSM2
[NCBI] 		268746 Uroviricota > Caudoviricetes > Pantevenvirales > Salacisavirus > Salacisavirus pssm2
Host Prochlorococcus
[NCBI] 		1218 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae >
Host Prochlorococcus marinus str. NATL1A
[NCBI] 		167555 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_214257.1 [NCBI]
Genbank nucleotide accession
NC_006883 [NCBI]
CDS location
range 22167 -> 22589
strand +
CDS
ATGGCAGCAACAGTATATAATGGAGTATTACAGGGAACTGGAGCAATTCACACTCAAGTCCTTTATACCAACAGTACTGGTAAAAATGTAAGGATAGTATGGAATTACTTTGGAGTAGGAAATACTCATCCTTCTGAACTTGGGATAGCTGTTGGTCCATCCTCTAATCCTAATCATAATGGTGGACAAGACCTTGATACAATGTATTTGTCATCACAAGCAAATTTCGCTGCAGGTAAATATCTTGCAGTGCAGAGGAATGATGATAATACATCAAACAATGCATATGGTTCTTATGGAGGTTCTTTTCCAACGGAACTTATGATACTTAATGGATCAAAAATTAGTATACTGATTCCTGCACAAATAGGTTCAAATACTAATGCTCTTACATATAATTTTGTAGCGATAACGGAAGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a2c17f3019842eeea2cf8193fa832496c563961e923facb8da782838470655e9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5682
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50