Protein

View in Explore
Genbank accession
QBI80413.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MNQNFVSQPNSHLPISAFLSDSWVEIADGTTLDLSKLDLSISFPCGLAAIDRSGALLPASVEVEVQAQHVAADGVENGEWLTAFKKVWSLNSLDRHEDNIEIGNGRAVRLRARLLRKGEGFARTDAYLKAQRQAAA
Physico‐chemical
properties
protein length:136 AA
molecular weight: 14816,48290 Da
isoelectric point:5,55808
aromaticity:0,06618
hydropathy:-0,18088

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_Pae_CF121b
[NCBI] 		2563540 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBI80413.1 [NCBI]
Genbank nucleotide accession
MK511007.1 [NCBI]
CDS location
range 17286 -> 17696
strand +
CDS
ATGAATCAGAACTTCGTTTCGCAACCTAACTCGCATCTTCCGATTTCAGCATTTTTGTCTGATAGCTGGGTAGAGATCGCCGATGGGACTACCTTGGACTTGTCCAAGCTAGACCTGAGCATCTCCTTCCCATGCGGACTGGCAGCCATTGATCGGAGCGGGGCGCTTCTGCCGGCGAGTGTCGAGGTGGAAGTGCAAGCACAGCATGTTGCTGCCGATGGAGTCGAAAATGGTGAATGGCTCACTGCATTCAAGAAGGTCTGGAGTCTGAACTCTCTTGATAGGCATGAGGATAATATTGAGATTGGCAATGGGCGCGCCGTGCGACTTCGCGCTCGTCTATTGCGAAAAGGTGAAGGCTTCGCCAGGACTGATGCCTATTTGAAGGCCCAACGCCAAGCGGCAGCTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ba989f0bb7f7a0a0f1f09939d3c051bf9d9adb420214aa6b35b042eb8c9b5042
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7841
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Mobilizing temperate bacteriophage communities and resolving individual phage genomes from cystic fibrosis and bronchiectasis Pseudomonas aeruginosa isolates Tariq,M.A., Everest,F.L.C., Cowley,L.A., Wright,R., Holt,G.S., Ingram,H., Duignan,L.A.M., Lanyon,C.V., Perry,A., Perry,J.D., Bourke,S., Brockhurst,M.A., Bridge,S.H., Soyza,A.D. and Smith,D.L. 2019 — GenBank