Protein

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Genbank accession
YP_010662987.1 [GenBank]
Protein name
baseplate wedge subunit
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MRKMANTDPIPQIVPGTTSVQDAIESANEGLARVVSNSQEINTLTSSLGSKSSLATVDKDTIVGAINEIANRLNDGFLVTDITGELADLETENRTNLVAALNELATSIGLLEDLDTTTHSSIVAAINEIIQNSGSVGSLSSLNSNDKSSIVAAINEVITSVGNTSTIENYNDLASAVSDLLSNFGTIGGLETNEKNSIVGAINEIKQETDGSLRSDGSVQSEANQNMGSHKITSLANGTEDTDAVAVGQVRELSGAGDLQSLTTTSKESLVAAVNEIVDLVGDLSSLTTTQKDNIVEAINEIASNVDYQNMQEKLEGIQTVLMGTEIASDHIQAILMRASVSNDYDSKIQRFAGVNGNLQVLNKGDGYIYFSTEAADGTVSSRVRVRPDDAVPLEVYKSGTWVQVSTGGNALLLVGGTMTGPIEFDIPDDDEKLVLAIDEFGLFSDNVGSYAGSTSRLAIVAPVNGDVHIGPRTGQMKGLKINSEKVEVSGEIFSNTDLTLMSDARTKSDVHTIEDALDSVAMMRGVHYVKDEMYSSGVIAQEIQKIAPELVKRNSEGFYGVNYTQLSAYFIEAIKELKRNVDDLREKNENLLLRI
Physico‐chemical
properties
protein length:596 AA
molecular weight: 63514,80970 Da
isoelectric point:4,37810
aromaticity:0,03859
hydropathy:-0,16577

Domains

Domains [InterPro]
DC_1369
ATT
1–80
DC_1369 DC_0811 DC_0203
DC_0811
STR
72–136
DC_0811 DC_0811 IPR030392
IPR030392
CHP
503–553
IPR030392 Coil
YP_010662987.1
1 596
Architecture
ATT
STR
STR
RBD
ATT 1-80 | STR 81-136 | STR 159-426 | RBD 480-595 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Agrobacterium phage Atu_ph04
[NCBI] 		2024263 Uroviricota > Caudoviricetes > Pootjesviridae > Rollinsvirus ph04 >
Host Agrobacterium tumefaciens
[NCBI] 		358 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010662987.1 [NCBI]
Genbank nucleotide accession
NC_070890 [NCBI]
CDS location
range 139223 -> 141013
strand +
CDS
TTGCGCAAGATGGCTAACACGGATCCTATTCCTCAGATTGTTCCTGGTACGACTTCCGTCCAGGACGCAATTGAATCTGCAAACGAAGGTCTCGCTCGAGTCGTTTCGAACTCTCAGGAAATCAACACTCTGACTTCTAGTCTGGGTTCGAAATCTTCTCTCGCGACGGTCGACAAAGACACGATTGTCGGTGCTATCAACGAGATCGCGAATCGTCTCAATGACGGATTCCTCGTAACGGATATCACTGGCGAACTCGCCGATCTCGAAACTGAGAATCGAACGAATCTCGTGGCTGCTCTCAACGAACTCGCCACCTCGATCGGCCTGCTCGAAGATCTCGATACGACAACCCACTCGTCCATCGTCGCCGCTATCAACGAGATCATCCAGAACAGCGGATCTGTCGGCAGTCTTTCGAGTCTGAACAGCAATGACAAGAGCTCTATCGTAGCTGCGATCAACGAGGTCATCACCAGCGTCGGAAACACATCGACTATCGAAAACTACAATGACCTCGCTTCCGCGGTATCCGATCTTCTCTCGAACTTCGGCACGATCGGCGGTCTCGAAACGAACGAGAAGAATTCTATCGTCGGAGCGATCAACGAGATCAAGCAAGAAACTGACGGCTCTCTCCGGTCCGACGGCTCTGTCCAGTCTGAAGCCAATCAGAACATGGGATCTCATAAGATCACGTCTCTCGCGAACGGAACTGAAGACACTGACGCCGTGGCAGTTGGTCAAGTTCGAGAACTCTCTGGAGCAGGCGATCTTCAGAGTCTCACGACAACTTCGAAAGAGAGCCTAGTCGCTGCGGTGAACGAGATTGTGGATCTCGTAGGTGATCTCTCGAGTCTGACTACGACTCAGAAAGATAACATTGTCGAAGCTATCAACGAGATTGCCTCGAACGTCGACTACCAGAACATGCAAGAAAAGCTCGAAGGAATTCAGACTGTTCTGATGGGAACCGAGATTGCATCGGATCACATCCAGGCTATTCTGATGAGAGCTTCCGTGTCGAACGACTACGACTCGAAGATTCAGAGATTCGCTGGAGTCAACGGAAACCTGCAGGTTCTCAACAAGGGTGACGGCTACATCTACTTCTCGACGGAGGCCGCTGACGGCACTGTTTCTAGCCGTGTTCGAGTTCGTCCTGATGACGCAGTTCCTCTCGAGGTCTACAAGAGCGGGACATGGGTTCAGGTCTCCACAGGTGGCAATGCTCTCTTGCTCGTCGGTGGAACGATGACAGGTCCTATCGAATTCGATATTCCTGATGACGACGAAAAGCTCGTTCTTGCCATCGACGAATTCGGTCTCTTCTCAGACAACGTCGGCAGCTACGCCGGATCGACATCTCGTCTCGCTATCGTCGCTCCTGTCAACGGTGACGTTCACATCGGTCCACGAACTGGTCAGATGAAAGGTCTGAAGATCAATTCAGAAAAGGTCGAGGTCTCAGGCGAAATCTTCTCGAACACTGACCTGACGCTGATGTCCGATGCTCGAACGAAATCCGATGTCCACACGATCGAAGATGCGCTCGATTCAGTCGCGATGATGAGAGGCGTTCACTACGTCAAGGATGAAATGTATTCGTCCGGTGTCATTGCACAGGAAATCCAGAAGATTGCTCCTGAACTCGTAAAGAGAAATTCAGAAGGCTTCTACGGCGTCAACTATACTCAGCTTTCTGCCTACTTCATCGAAGCCATCAAGGAGCTCAAGAGAAACGTTGACGACCTCCGCGAGAAAAACGAGAATCTTCTCTTGCGAATCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
368e90fe978e8e170233d84bc645f27946239489d19baac2c1cebeffdacb5d04
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6844
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50