Protein

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Genbank accession
AKJ74230.1 [GenBank]
Protein name
portal protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACRVNGLRLIGIRSTDGQSLTIDAPNSTVSGITGMVDPSRINVANLAEEGLGNIRANSFGYDSAAIKLRIHKLSKTLDSGALYSHINGGAGSGSAYTQLTAISGSTPDAVSLKVNHKDCRGAEIPFVPDIASDDFIKDSSCFLPYWENNSTSLKALVKKPNGELVRLTLATL
Physico‐chemical
properties
protein length:265 AA
molecular weight: 28244,58150 Da
isoelectric point:5,64345
aromaticity:0,06415
hydropathy:-0,07811

Domains

Domains [InterPro]
IPR015331
RBD
1–263
IPR015331
IPR011050
STR
1–265
IPR011050
IPR012332
STR
1–265
IPR012332
AKJ74230.1
1 265
Architecture
STR
STR 1-265
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AKJ74230.1
1 265
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0059
Central domain 11 199 190 0,7897
C-terminal 200 265 65 0,9465
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-199
C-terminal
200-265

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage 34
[NCBI] 		1654887 Uroviricota > Caudoviricetes > Lederbergvirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AKJ74230.1 [NCBI]
Genbank nucleotide accession
KR296688 [NCBI]
CDS location
range 39651 -> 40448
strand -
CDS
ATGAATCCGGAGTTGGACAGGCCAGGGGACTACCCTATAACCCAATACCCACTGCATCAGTTACCCCTAAATCACCTGATTGATAATCTTCTGGTTCGCGGGGCGTTAGGTGTAGGTTTTGGTATGGATGGTAAGGGCATGTATGTGTCTAATATTACCGTAGAAGATTGCGCTGGGTCTGGCGCGTACCTACTCACCCACGAATCAGTATTTACCAATATAGCCATAATTGACACCAATACTAAGGATTTCCAGGCGAATCAGATTTATATATCTGGGGCTTGCCGTGTGAACGGTTTACGTTTAATTGGGATCCGCTCAACCGATGGGCAGAGTCTAACCATAGACGCCCCTAACTCTACCGTAAGCGGTATAACCGGGATGGTAGACCCCTCTAGAATTAATGTTGCTAATTTGGCAGAAGAAGGGTTAGGTAATATCCGCGCTAATAGTTTCGGCTATGATAGCGCAGCGATTAAACTGCGGATTCATAAGTTATCAAAGACATTAGATAGCGGAGCATTGTACTCCCACATTAACGGGGGGGCCGGTTCTGGCTCAGCGTATACTCAACTTACTGCTATTTCAGGTAGCACACCTGACGCTGTATCATTAAAAGTTAACCACAAAGATTGCAGGGGGGCAGAGATACCATTTGTTCCTGACATCGCGTCAGATGATTTTATAAAGGATTCCTCATGTTTTTTGCCATATTGGGAAAATAATTCTACTTCTTTAAAGGCTTTAGTGAAAAAACCCAATGGAGAATTAGTTAGATTAACCTTGGCAACACTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
ca1f7e9f692f90e3d2baff86fcbed71fd62cf325220f175dc07ec6b45dae5188
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5993
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50