Protein

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Genbank accession
WGJ78332.1 [GenBank]
Protein name
baseplate protein
RBP type
TSP
Evidence DepoScope
Probability 0,95
Protein sequence
MFVDEFSSVYECLLYCYRYVKRSEQLNGRRVFPILSVVTNNKDPEGRRRVKIADPLFSNLVESNWIRPIRVSQNQDNPLPQVNQMVIVWFVDGDSEKGYYLPIINDANPSRDKNDPVNDSAVRIEGNNSLKIDGNDSEDIGGNQTVAIAGEQNINVGSDLIESIGGDINQDVEGKIEVRSESTILIDADGTIIIKNDSGAFISLGGNGEVLIQDSAGRKLRLGGAFNSTWDLNNLPMSFINATSVTIAGKQIATVGAVDNQGHVIVSKGWP
Physico‐chemical
properties
protein length:271 AA
molecular weight: 29655,78120 Da
isoelectric point:4,64115
aromaticity:0,06642
hydropathy:-0,29520

Domains

Domains [InterPro]
DC_1119
STR
1–270
DC_1119
IPR037026
ATT
30–108
IPR037026 SSF69349
IPR006531
STR
36–102
IPR006531
WGJ78332.1
1 271
Architecture
STR
ATT
STR
STR 1-29 | ATT 30-108 | STR 109-270 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WGJ78332.1
1 271
Domain Start End Length (AA) Confidence
N-terminal 1 171 171 0,9188
Central domain 172 260 90 0,0818
C-terminal 261 271 10 0,9894
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-171
Central
172-260
C-terminal
261-271

Taxonomy

  Name Taxonomy ID Lineage
Phage Dolichospermum phage Dfl-Yong418-1
[NCBI] 		3038320 Viruses >
Host Dolichospermum flos-aquae
[NCBI] 		1166 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WGJ78332.1 [NCBI]
Genbank nucleotide accession
OQ560326 [NCBI]
CDS location
range 67552 -> 68367
strand -
CDS
ATGTTTGTCGATGAGTTTTCTAGTGTTTATGAATGTTTGTTGTATTGCTATCGGTATGTTAAGCGATCAGAACAACTAAACGGCCGTCGTGTGTTTCCTATATTATCAGTGGTCACAAACAATAAAGATCCTGAAGGCCGCAGACGTGTTAAAATCGCTGATCCGTTGTTTAGTAACTTGGTTGAATCAAATTGGATACGACCTATCAGAGTCAGCCAAAATCAAGATAATCCATTGCCGCAAGTCAATCAAATGGTTATTGTTTGGTTTGTGGACGGTGACAGCGAAAAAGGTTATTACTTACCAATAATTAATGATGCTAACCCGTCAAGAGACAAAAATGATCCAGTCAATGATAGTGCTGTTCGTATTGAAGGCAACAACAGTTTAAAAATCGATGGTAATGACTCTGAGGATATCGGGGGCAACCAAACGGTAGCGATCGCTGGTGAACAGAATATAAATGTTGGAAGTGACTTAATAGAATCTATAGGAGGTGACATCAATCAAGATGTGGAAGGCAAAATAGAGGTTAGAAGCGAATCTACGATATTGATAGATGCTGACGGTACAATCATCATTAAAAACGATTCCGGGGCGTTTATCAGTCTCGGAGGGAACGGTGAAGTGCTGATCCAAGATTCGGCTGGTAGAAAACTACGTTTAGGTGGTGCGTTTAACTCTACATGGGATTTAAATAACTTACCAATGAGTTTCATCAATGCAACGTCTGTAACAATTGCAGGTAAACAAATCGCCACTGTGGGAGCGGTAGACAATCAAGGTCATGTGATAGTTAGCAAAGGATGGCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f725ffa36560cb1e20e7e5c6a0d99265e765c097766b0d2984bca2600cdd2a77
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7470
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50