Protein

View in Explore
Genbank accession
QBX30535.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,53
Protein sequence
MLLTIHDASLRKVAFIDNDKQATLNYFNDTWIRYLETGSSTFDFTVFKKAIISDVGRKRAYNYLNEKAFVSFQYKGKTYLHTIRKIEENEQVIKCYGINLNLELINEYANPYKAPKAMTFKEYCDAMDLLNFTFLKIGVNEISTQKISAEWEGTDTKLNRLLSLAKKFGAEIEFDTHLNADSSIKSFIVNVYHENDDDHQGVGRVSPTILKYGKNLKALTRTVDKTNVYNMVRPTGRTEDGKTVTISGLSAWSVNNSKGEREFYQAGEGLYAPLSMQMYPAAFTSGTTGDQWIRKDMTVESSNPEVIRSTAYRELKKNCYPAVTYEAEGFADLEIGDTVQVYDDGFSPVLLLEMRVSEQTISFTNPKNNKTTFSNAKALENRLSNGIQERLNQMIEASKPYLIKLATDNGVIFKNGTGQSIVTPTLYKGGKPLTANVTWRWSLDGAVKTGMTYSVRGADVTDTSTLTVAAYIGNDEVAVDELTFVNVLDGRDGGVGPKGDPGNDGVAGRDGQTPVVHWAYSDNADGTGLITSDNGQRYIGHYSDYTQADSTDKTKYRWADRWAKIEVGGRNLFKGSRDFSGVWFNNGNGVFFEEYKGVHIHRTKTAWLGKSQSIYVKSGEIYTFSFYAKSDSENDAVMFYLSHSATGTPAQGHPNNKNIGISTDYQRYSITIKIASDGIIVPRLERTNTTSFLFFGGFKLETGTLATDWSPAPEDLQNQLNSKADQALTQEQLNSLNERAGIIRAELEAKASLDTVNNILKQIKDMKAADEATWAKVEKDLITHLQRVIKIETNLGDQAQRWNAVDTFMQVSNDGLSLGKADGSSSILFSPDGRITMFSSGTPVMYVDKGVIHIDNGIFSKTVQIGRFREEQYHNNPDINVKRYVGG
Physico‐chemical
properties
protein length:887 AA
molecular weight: 98927,58410 Da
isoelectric point:6,05775
aromaticity:0,10259
hydropathy:-0,47317

Domains

Domains [InterPro]
DC_0002
STR
1–887
DC_0002
IPR007119
Unmapped
61–373
IPR007119 G3DSA:2.60.120.260
IPR010572
ENZ
137–377
IPR010572 IPR008979
QBX30535.1
1 887
Architecture
STR
STR 1-887
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan554
[NCBI] 		2548256 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus suis 89-3576-3
[NCBI] 		1214171 Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Streptococcus > Streptococcus suis

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX30535.1 [NCBI]
Genbank nucleotide accession
MK448982.1 [NCBI]
CDS location
range 29924 -> 32587
strand +
CDS
ATGTTATTGACAATCCATGACGCAAGTTTGAGAAAGGTTGCTTTTATTGATAATGATAAACAGGCTACGCTGAATTATTTCAACGATACCTGGATTAGGTACCTTGAAACAGGTTCTAGTACATTTGATTTCACAGTATTCAAAAAAGCTATCATTTCAGATGTGGGGCGTAAGCGTGCCTACAACTATCTGAATGAGAAAGCCTTTGTTTCATTTCAGTACAAAGGCAAGACTTATCTGCACACAATCCGCAAAATTGAGGAAAATGAGCAAGTTATCAAGTGCTATGGTATCAATCTGAACCTTGAACTTATCAATGAGTATGCAAATCCATATAAAGCACCTAAGGCTATGACTTTCAAAGAATACTGTGACGCAATGGACTTGCTAAACTTTACATTCTTGAAAATTGGTGTAAATGAGATTTCTACTCAGAAAATCTCTGCTGAGTGGGAGGGGACAGACACCAAACTCAACCGTCTACTTAGTCTAGCTAAGAAATTTGGTGCAGAAATTGAATTTGACACCCACCTCAACGCTGATAGCTCTATCAAATCGTTTATCGTAAACGTCTATCATGAGAATGATGACGATCATCAAGGAGTAGGGCGTGTCAGCCCTACTATTTTGAAGTATGGCAAAAACCTCAAGGCGCTTACTAGGACGGTTGACAAAACTAATGTCTACAACATGGTTCGTCCAACTGGGAGAACTGAGGACGGTAAAACTGTCACCATTTCAGGTCTTAGTGCATGGTCTGTCAATAACTCTAAAGGGGAACGCGAATTTTATCAGGCAGGAGAGGGGCTATATGCCCCTCTTTCTATGCAGATGTATCCAGCAGCCTTTACAAGTGGCACAACGGGTGACCAGTGGATAAGAAAGGATATGACTGTAGAGAGTTCAAATCCTGAGGTTATCCGATCAACTGCTTACCGTGAACTTAAAAAGAACTGCTATCCAGCTGTTACTTACGAGGCGGAGGGGTTTGCTGACCTTGAAATAGGGGACACTGTCCAAGTTTATGATGACGGCTTTAGTCCTGTTCTATTGCTTGAAATGAGGGTGTCTGAGCAAACCATTAGCTTTACCAACCCTAAGAACAACAAGACAACCTTTTCCAACGCTAAGGCGCTGGAAAATCGTCTTTCAAATGGTATTCAAGAACGACTGAACCAGATGATTGAAGCCTCTAAACCCTACCTTATCAAACTGGCTACTGATAATGGTGTTATTTTCAAGAATGGAACTGGTCAATCCATTGTGACACCCACTCTTTACAAGGGCGGTAAGCCTCTGACTGCCAACGTGACTTGGCGCTGGTCTTTGGATGGCGCTGTTAAAACGGGGATGACCTACAGTGTCCGTGGTGCAGATGTTACGGATACATCTACTTTGACGGTGGCAGCATACATAGGTAACGATGAGGTAGCTGTTGATGAGCTGACGTTTGTAAACGTATTGGATGGTCGAGATGGTGGAGTCGGGCCGAAAGGAGACCCTGGCAATGACGGTGTCGCTGGGCGTGATGGTCAAACGCCCGTAGTGCATTGGGCTTATTCTGATAATGCAGACGGTACAGGTCTGATCACGTCGGATAATGGTCAGCGGTATATTGGTCACTATTCAGATTATACGCAAGCCGATAGTACGGATAAGACTAAGTATCGCTGGGCTGATAGATGGGCGAAGATTGAGGTTGGTGGGCGAAATTTGTTTAAAGGAAGTCGAGATTTTTCGGGTGTTTGGTTTAACAATGGTAATGGTGTGTTTTTCGAAGAATATAAAGGTGTTCATATTCATAGAACAAAAACTGCTTGGTTAGGCAAGTCACAGAGCATTTATGTGAAATCCGGGGAAATATATACATTCAGCTTTTATGCCAAGAGTGATTCTGAAAATGATGCGGTTATGTTTTATCTTTCTCATAGCGCAACAGGAACACCCGCACAGGGTCATCCTAATAATAAAAATATTGGAATTTCAACTGATTATCAGCGCTACTCCATCACCATTAAAATAGCTTCTGATGGCATAATTGTTCCGAGATTAGAAAGAACTAACACAACGAGTTTTTTGTTTTTTGGAGGTTTTAAACTTGAGACTGGTACACTTGCGACAGACTGGTCGCCCGCTCCAGAAGACCTCCAAAACCAACTCAACTCAAAAGCCGACCAAGCATTGACCCAAGAGCAACTCAATTCACTAAACGAGCGGGCAGGTATCATCCGAGCGGAACTGGAAGCCAAAGCGAGTCTAGATACTGTAAACAATATCTTGAAACAAATCAAAGATATGAAAGCAGCCGACGAAGCTACATGGGCCAAAGTTGAAAAGGACCTGATAACTCACTTACAGCGTGTCATAAAAATTGAGACAAACCTAGGAGACCAAGCACAGCGCTGGAATGCGGTAGATACCTTTATGCAGGTCTCAAACGATGGTTTGTCACTAGGTAAGGCAGATGGTAGCTCCAGCATATTGTTTAGTCCAGATGGACGTATCACGATGTTTTCGAGTGGTACTCCAGTCATGTATGTGGATAAAGGGGTTATCCACATTGACAACGGTATCTTTTCAAAGACGGTTCAAATTGGACGTTTTAGAGAAGAACAGTATCATAACAACCCAGACATTAATGTTAAACGATACGTAGGAGGATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
8b3acda0e1e6d1492a01303d4a7994f3e0753546b9b73e1b8629aa3465705ee8
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3145
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank