Protein
View in Explore- UniProt accession
- A0AAU8BVP0 [UniProt]
- Protein name
- Receptor-binding protein
- RBP type
-
TSPTSP
- Protein sequence
-
MSFFAGKFSDGKTVLSLNAANGGDTGEHYSPNTNSIFHSDMPFVLVDGTYEAALGNAGNGYFVTQMPWDIINIKSNDPGRVILTAIEINGTHRGFLNGTQSQVGQFLSFFEDPPRAGAELSVTSAFAIGDSLAHGTYIYNGGLGHEESIARQGSGGSLLQSSGFQIFRPGGVPAGEAIARAWSLMGFPTGVSTVPLNGGNADYWDPNWQAPIGSAGRGHDWFYVCSSNIRGFAGKKGVLPDNVNINYQSPSFPTKVYVCRGSTTNMAAQATRKVYVQDWYNVTPTKVIWYVLNLRYSNGSMGVSGNPFTGSDILISPSNFTIKGVSLPNTGYKFINQNAFGNLGYRPDMEYVGNNAAYTGVFGDNTARCEFIGSSNGGLWSPINYGGAASQISLYKFGVGKQWYVDTNTNSIGNEHGPVWSPSTVPLRLFPSNVVSTYVGDDITPSYPGAGDFYTPLATVWLGLPNAHSTVILTTEVIMGNLNTAGMPVRTYGGSAWQVQGRRQQSYTAGDGVFHQILTLPPGYLVPYHSTTSYSYTQTWASRPDEMAFRRNGYIYTIKNLGNGNVELGVVIHAAEPAAIFLPRLRVTVQRLT
- Physico‐chemical
properties -
protein length: 593 AA molecular weight: 63909,60500 Da isoelectric point: 6,83201 aromaticity: 0,12310 hydropathy: -0,18196
Domains
Domains [InterPro]
IPR059609
RBD
1–593
RBD
1–593
1
593
Architecture
RBD 1-593
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
593
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 10 | 10 | 0,5829 |
| Central domain | 11 | 243 | 234 | 0,7224 |
| C-terminal | 244 | 593 | 349 | 0,7875 |
Note: Constraints were applied during segmentation.
Fixed 8 C-terminal predictions appearing before Central domain
Fixed 8 C-terminal predictions appearing before Central domain
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-10
1-10
Central
11-243
11-243
C-terminal
244-593
244-593
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Salmonella phage PMBT27 [NCBI] |
3137285 | No lineage information |
| Host |
Salmonella enterica subsp. enterica [NCBI] |
59201 | Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella |
Coding sequence (CDS)
Coding sequence (CDS)
No CDS data available.
Genome Context
Genome Context
Tertiary structure
PDB ID
e25987b383042044281a6d9de8bf7f0fbdc07e77209ff0042b9cfc4d1589a1f9
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50