Protein

View in Explore
Genbank accession
QDB73379.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MDQDIKTVIQYPVGTTEFDIPFDYLSRKFVRVSLVSDDNRRLLSNITEYRYVSKTRVKLLVETDGFDRVEIRRLTSASERVVDFSDGSVLRAADLNVSQIQSAHIAEEARDAALMAMPQDDAGNLDARNRRIVRLAPGVEGTDAINKNQLDTTLGDAGGILSDMKDLEGEIHDYIEKFADDTALVRGVAWVYNLGSADGGETVITINKSTRTYAVPYIEVNGSRQEVGYHYSFDLETQQITLATPLKAGDFVMVMTTESQLPVETLLASSVGASSIGTATGETVEERLTRLYGHFVHPETYGAVGDGITDDRVALQRSLDVAYENALNGTGPSTVRWSGDYMVSLNPNSLGVSGELAAGRSALCIRPGVSIEGKGTVRLDPSFTGSQSGAVITNWAGPVDDCSIKDIRIYGGKDVATGTGITGILILDSQRVVISDVKVLNSTAGGIYLRKGATEGLYGCSFSKVSGCTVDNAGYIGIQMERPYDNTVIGNTINRCEDNGIDVFGNVNDAMVTGIAQSTLITGNNIRDVLNGVFIESCGNTNITGNYIADFRSSGVIYNRINSAANDNSLTSNVLIGASGASAGVSFKNSVGYCTVASNRIQNSDYGIRCVGGGITGLNILPNTMKNIAKTLLFVEARNNGLVKSRMSTQFYEGAQVGGIPSNTSPRGVPHRFPSRLSYIVDIQPFWATEQGTREDNFERAKGTLASITGWGSKCALYDTIVAGDTVVSLNSSSVAVGEYLEINAEVYKVTSVSATYAVVRKWTGSDYTAGDYAAVIISNPSYIIRRVQWGEQ
Physico‐chemical
properties
protein length:793 AA
molecular weight: 85197,27600 Da
isoelectric point:4,96156
aromaticity:0,07440
hydropathy:-0,13493

Domains

Domains [InterPro]
DC_0778
STR
1–461
DC_0778 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 DC_0517
IPR005604
ATT
3–127
IPR005604 IPR011050
IPR012334
STR
299–642
IPR012334
IPR039448
ENZ
366–513
IPR039448
IPR006626
Unmapped
399–428
IPR006626 IPR006626 IPR022441
DC_1312
RBD
409–665
DC_1312
IPR006626
Unmapped
460–482
IPR006626
QDB73379.1
1 793
Architecture
ATT
STR
RBD
ATT 1-127 | STR 128-642 | RBD 643-793
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDB73379.1
1 793
Domain Start End Length (AA) Confidence
N-terminal 1 310 310 0,9938
Central domain 311 698 389 0,9838
C-terminal 699 793 94 0,9424
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-310
Central
311-698
C-terminal
699-793

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage IME304
[NCBI] 		2584486 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Przondovirus
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDB73379.1 [NCBI]
Genbank nucleotide accession
MK795385.1 [NCBI]
CDS location
range 8040 -> 10421
strand +
CDS
ATGGACCAAGACATTAAAACAGTCATTCAGTACCCGGTAGGGACCACTGAGTTCGACATCCCGTTCGACTACCTGTCCCGTAAGTTTGTCCGTGTGTCACTGGTGTCGGACGACAATCGAAGACTGCTGAGCAACATCACCGAGTATCGCTACGTGTCTAAGACCAGAGTGAAACTCCTTGTGGAGACAGATGGGTTCGACCGTGTGGAAATCCGCAGGTTAACCTCAGCTTCAGAGCGTGTAGTTGACTTCAGTGATGGCTCAGTTCTCCGTGCGGCAGACCTTAACGTTTCTCAGATTCAGTCCGCACATATCGCAGAGGAAGCACGTGACGCGGCACTCATGGCCATGCCTCAGGATGATGCAGGTAACCTCGATGCCCGTAACCGCAGAATCGTTCGACTGGCTCCGGGTGTTGAAGGTACTGACGCAATCAACAAGAACCAGCTGGACACAACTCTAGGAGATGCTGGTGGTATCCTATCGGACATGAAGGACCTAGAGGGTGAGATTCATGACTACATCGAGAAGTTTGCAGATGACACTGCGCTTGTGCGTGGGGTGGCGTGGGTGTATAACCTTGGTTCCGCTGATGGTGGGGAAACCGTTATCACCATAAATAAATCGACACGTACATACGCTGTGCCTTACATTGAGGTAAATGGCTCACGCCAAGAGGTCGGGTATCACTATTCGTTCGATCTGGAAACACAGCAGATAACCCTTGCCACCCCATTGAAAGCTGGCGACTTCGTTATGGTAATGACCACAGAGTCTCAGCTCCCGGTAGAGACCTTGCTGGCATCTAGCGTTGGTGCCTCGAGCATCGGGACGGCCACAGGAGAGACAGTTGAGGAGCGACTTACTCGACTTTACGGGCACTTTGTGCACCCTGAGACGTATGGTGCTGTAGGTGATGGCATCACAGACGACCGAGTTGCACTCCAGCGCTCACTAGATGTGGCTTATGAGAATGCGCTGAATGGTACTGGCCCGTCGACTGTACGCTGGTCAGGAGACTACATGGTGTCGCTGAACCCTAACTCACTAGGCGTTTCTGGGGAACTGGCAGCAGGTCGCTCAGCACTATGTATCCGACCCGGTGTGTCAATTGAAGGTAAGGGCACGGTCCGTCTTGACCCATCCTTTACAGGAAGCCAGTCTGGCGCAGTAATAACCAACTGGGCTGGTCCAGTTGACGACTGCTCCATTAAGGATATACGGATTTACGGCGGTAAGGACGTAGCCACTGGTACTGGCATAACCGGAATCCTTATTCTGGATTCACAGAGAGTAGTCATATCTGACGTTAAGGTTCTGAACAGTACAGCTGGTGGTATCTATCTGAGAAAAGGTGCCACAGAGGGGCTGTATGGATGCTCATTCAGCAAGGTCTCAGGGTGTACTGTGGATAACGCTGGGTACATTGGAATCCAGATGGAGAGACCGTACGATAATACCGTCATTGGGAACACAATCAATCGGTGTGAAGATAACGGCATTGACGTGTTCGGTAACGTAAACGATGCTATGGTAACGGGCATTGCGCAATCCACGCTAATCACTGGCAACAACATAAGGGATGTCCTAAACGGAGTGTTCATTGAATCCTGCGGCAACACAAACATTACCGGAAACTACATCGCGGACTTTCGCTCCAGCGGGGTCATCTACAACCGCATCAACTCGGCGGCAAATGATAACTCACTCACCTCAAACGTCCTCATCGGCGCCTCAGGTGCTTCGGCAGGTGTTAGCTTCAAGAACTCAGTAGGATACTGTACAGTGGCGAGCAACAGGATTCAAAATAGTGACTACGGGATTCGATGCGTTGGCGGAGGCATTACCGGGCTTAACATCCTCCCAAATACGATGAAGAACATCGCTAAGACCCTGCTGTTTGTGGAGGCCCGTAACAACGGTCTGGTCAAGTCACGTATGTCTACCCAGTTCTACGAAGGGGCACAGGTCGGCGGGATTCCGAGTAACACCTCTCCAAGAGGAGTACCGCACAGATTCCCATCAAGGCTCTCTTATATTGTGGATATCCAACCGTTCTGGGCAACAGAGCAGGGTACCCGCGAGGATAACTTCGAGAGAGCAAAAGGGACCTTGGCGTCAATCACTGGGTGGGGTTCAAAGTGTGCCCTGTATGACACGATTGTGGCAGGTGATACGGTGGTGTCTCTTAACTCATCGTCAGTAGCTGTGGGCGAATACCTTGAGATTAACGCGGAGGTTTATAAGGTTACTAGCGTATCTGCAACTTACGCCGTTGTTCGAAAATGGACTGGTTCGGATTACACGGCTGGAGACTACGCAGCGGTAATTATTAGTAATCCATCCTACATCATTCGCCGGGTGCAGTGGGGCGAACAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
115552da5c16913b1833ecad98add6b7a4c4c1e0bc06a7125d1c5cdb6708ebbc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7328
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50