Protein

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Genbank accession
WPK38783.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,50
Protein sequence
MLKIKGSPSVGKISATINRPFLTKTLVTTMPQNIANFTAGYGGGMLHIFGGEAVPSVGQIQIYRRYNIATNTWLSPSGNIGAWAWGGGGYYNGSFWALCGSNNGYNTSYFQINPSTATGTRYTDMAGGSRGQGRTASVDNLNVFVIGGIGQNNITNALCYRFNASTRAWTVRTSMPSPRNGHTIGSYNGKIYVLGGWNETSNNLSDVLEYNISTNTWTTLPTTIPGVPSSWFGGFVYKQYAVYGASSSSNTLLFKILDLNKMTWEILDTGLPRRWSAEYVVTETGVYMIGGSSSYPGASNYFTAPRYNEIYFFKG
Physico‐chemical
properties
protein length:315 AA
molecular weight: 34270,00670 Da
isoelectric point:9,51723
aromaticity:0,13968
hydropathy:-0,21270

Domains

Domains [InterPro]
IPR015915
STR
24–129
IPR015915 PF24681
IPR015915
STR
87–314
IPR015915
IPR015915
STR
97–297
IPR015915
PTHR46344
Unmapped
135–292
PTHR46344
IPR006652
STR
142–189
IPR006652 IPR006652
WPK38783.1
1 315
Architecture
STR
STR 24-314 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPK38783.1
1 315
Domain Start End Length (AA) Confidence
N-terminal 1 47 47 0,1256
Central domain 48 251 205 0,5412
C-terminal 252 315 63 0,5804
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-47
Central
48-251
C-terminal
252-315

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Cassandra
[NCBI] 		3092175 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK38783.1 [NCBI]
Genbank nucleotide accession
OR805292 [NCBI]
CDS location
range 84535 -> 85482
strand +
CDS
ATGTTGAAAATAAAAGGAAGTCCATCCGTAGGCAAAATATCAGCAACAATTAATAGACCGTTTTTAACTAAAACCTTAGTTACTACGATGCCACAAAACATTGCAAATTTTACTGCAGGATATGGTGGCGGAATGTTGCATATATTCGGAGGCGAAGCTGTTCCTAGTGTAGGCCAAATACAAATATATAGACGATACAATATAGCAACTAATACCTGGTTAAGTCCTAGCGGAAACATAGGAGCCTGGGCATGGGGAGGCGGCGGCTATTACAATGGAAGTTTTTGGGCGCTGTGTGGTTCTAATAATGGATATAATACTTCGTATTTTCAGATAAACCCTTCCACTGCAACAGGTACACGATATACAGATATGGCAGGCGGTTCTAGAGGACAAGGAAGAACTGCATCAGTAGATAATCTAAACGTATTTGTTATAGGAGGTATTGGGCAAAATAATATAACAAATGCATTGTGTTATAGATTTAATGCTAGTACAAGAGCATGGACAGTAAGAACAAGTATGCCATCGCCAAGAAATGGACATACCATAGGATCGTATAACGGGAAAATATATGTACTAGGTGGCTGGAACGAAACATCAAACAACCTTTCAGACGTTCTAGAATACAACATATCTACTAATACGTGGACAACTTTACCCACTACAATTCCTGGAGTACCTTCTAGCTGGTTCGGTGGGTTTGTGTATAAACAATATGCTGTATACGGCGCGTCATCTTCTTCTAATACGCTTTTATTTAAAATATTAGATTTAAATAAAATGACATGGGAAATTTTAGATACCGGCTTGCCGCGCCGCTGGTCTGCAGAATATGTAGTTACAGAAACTGGTGTATATATGATAGGCGGTAGTAGTTCTTATCCCGGCGCGTCCAACTATTTTACTGCCCCTAGATATAACGAAATATATTTCTTCAAAGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a095b230509dd9c2fc09199c9e897b059300436a6c6b939fb9bbd5a1687af560
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9123
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage Paride can kill dormant, antibiotic-tolerant cells Maffei,E., Harms,A. and Humolli,D. — — GenBank