Protein

View in Explore
Genbank accession
WCD56126.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,68
Protein sequence
MADNPMLDPSISYSTNRFTSNGVQTTFELSLAGGYLSQAHVKAYYVNDADENVLVPLTFVGANTVSITAPIPSGKVLVVYRDTPKDAPLVDFTDGAVINEKTLDKLAKQAILATGEMIDRFKETIFEGAAVQAIAEGAVATAEDAADEAAFASADAAAALAASAQAVLTANNASASATNTASQFAALVATVTSITGADYSGFVTATNTLTIGGTKTFANAVTIGTVANTRIVLNTNGTYTINGTTRAFNAWGDLTGVPSTFPPSPHTHSQSDITGLGTALSNLTTSVNGKVADGDSLKGDRQTIVTPTITAGVLTLNLALGSVFDVAWDANITSVVVQNAPTGMANWTLILKAIASGGTSVTWNASVFKFVNGVAPTLISTVGAQNFLSMCTRNQGSRVDVFFSGATP
Physico‐chemical
properties
protein length:408 AA
molecular weight: 41856,33660 Da
isoelectric point:4,63774
aromaticity:0,07108
hydropathy:0,21520

Domains

Domains [InterPro]
DC_0245
STR
1–406
DC_0245
IPR005604
ATT
13–125
IPR005604
WCD56126.1
1 408
Architecture
STR
ATT
STR
STR 1-12 | ATT 13-125 | STR 126-406 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Caulobacter phage BL199
[NCBI] 		3020396 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Caulobacter crescentus
[NCBI] 		155892 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Caulobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCD56126.1 [NCBI]
Genbank nucleotide accession
OQ135103.1 [NCBI]
CDS location
range 35685 -> 36911
strand +
CDS
ATGGCTGACAATCCTATGCTAGACCCTAGCATTTCCTACTCGACTAACCGCTTTACCAGCAACGGCGTTCAGACTACGTTTGAACTGTCCCTGGCCGGTGGGTACCTATCGCAGGCTCACGTCAAGGCGTACTACGTCAATGACGCCGATGAGAACGTTCTGGTCCCCCTGACCTTCGTTGGCGCGAACACTGTGTCCATTACCGCCCCGATCCCCTCGGGTAAGGTGCTGGTCGTGTACCGCGACACCCCGAAGGATGCGCCCCTGGTGGACTTCACCGATGGTGCGGTTATCAACGAGAAGACCCTCGACAAGCTCGCCAAGCAGGCCATCCTGGCTACGGGCGAGATGATCGACCGCTTCAAAGAGACCATCTTCGAAGGTGCCGCCGTCCAGGCTATCGCCGAAGGGGCGGTCGCTACCGCAGAGGATGCGGCGGATGAAGCGGCTTTCGCCAGTGCTGACGCTGCTGCGGCCCTTGCGGCCTCTGCTCAGGCAGTCCTGACCGCAAACAACGCCTCGGCCTCGGCGACCAACACGGCTTCGCAGTTCGCTGCTCTGGTCGCCACGGTGACGTCTATCACTGGTGCGGACTACTCCGGCTTCGTGACGGCTACGAATACCCTGACCATCGGCGGTACCAAGACGTTCGCCAACGCGGTGACCATCGGCACTGTCGCCAACACCCGCATCGTCCTGAACACCAACGGGACGTACACGATCAACGGCACCACGCGAGCGTTCAACGCTTGGGGCGACCTGACCGGCGTACCCTCGACGTTCCCGCCTAGCCCGCACACGCACTCGCAGTCGGACATCACCGGCCTGGGTACTGCGCTGTCCAATCTGACCACCAGTGTCAACGGCAAGGTCGCGGATGGTGACAGCCTCAAGGGAGACCGCCAGACTATCGTGACCCCCACGATTACAGCAGGTGTGCTCACGCTGAACCTCGCCCTTGGGTCTGTGTTCGACGTGGCTTGGGATGCGAACATCACGAGTGTCGTGGTGCAGAACGCCCCTACGGGCATGGCTAACTGGACGCTGATCCTCAAGGCCATCGCCTCCGGTGGCACGTCTGTGACGTGGAACGCTAGCGTGTTCAAGTTCGTGAACGGCGTGGCCCCCACGCTGATCAGTACTGTGGGTGCGCAGAACTTCCTCAGCATGTGTACCCGTAACCAGGGCTCGCGTGTGGATGTGTTCTTCTCCGGGGCTACCCCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
dbe7e76d4e253b797bb1c55c484fc938cafb4d62088ad1db9599ad68666d5451
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8133
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
New Genera and Species of Caulobacter and Brevundimonas Bacteriophages Provide Insights into Phage Genome Evolution Ely,B., Hils,M., Clarke,A., Albert,M., Holness,N., Lenski,J. and Mohammadi,T. 2024 — GenBank