Protein

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Genbank accession
YP_009800999.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MAKSILSALSSKPSTSFINENTGVPCWTAARIVDVSIISDSDNANSPLSNQQLNEASVSSELLSEDVKTAKILRPSRLRVTIITDNISLIENVLGLFADVTVTISITSKSIVANSMSITDVEVDQSSEMLSASKVIVTLEQVIVASGSRFNPAQDSDSDNYGLGVQSPSRVGASLSTAATSAGSLLSSAGTAVASLYNRIKNQIGI
Physico‐chemical
properties
protein length:206 AA
molecular weight: 21466,86400 Da
isoelectric point:4,69424
aromaticity:0,02913
hydropathy:0,15291

Domains

Domains [InterPro]
IPR054442
ATT
4–201
IPR054442
YP_009800999.1
1 206
Architecture
ATT
ATT 4-201 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage Carpasina
[NCBI] 		2163636 Uroviricota > Caudoviricetes > Lindbergviridae > Carpasinavirus carpasina >
Host Xanthomonas campestris
[NCBI] 		339 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009800999.1 [NCBI]
Genbank nucleotide accession
NC_047962.1 [NCBI]
CDS location
range 17363 -> 17983
strand +
CDS
ATGGCGAAGTCGATCCTATCTGCACTTTCCAGCAAACCATCAACAAGTTTCATCAATGAAAATACCGGAGTTCCTTGTTGGACTGCCGCGCGAATCGTTGATGTCTCGATAATCTCTGATTCCGATAATGCGAATTCGCCTCTTTCGAACCAGCAGTTGAATGAGGCTAGCGTAAGCAGTGAATTGTTATCCGAAGACGTGAAGACTGCGAAGATATTGCGGCCTTCACGTCTTCGTGTGACTATCATAACAGACAATATATCTCTGATAGAAAACGTGCTTGGCCTTTTTGCCGACGTTACGGTTACAATATCCATAACATCCAAGTCCATAGTTGCCAACTCCATGTCGATAACTGATGTGGAAGTCGATCAATCATCTGAAATGCTTTCCGCGTCAAAGGTGATAGTTACTCTTGAGCAAGTAATAGTCGCATCAGGCTCTAGATTCAATCCTGCGCAAGACTCAGACAGTGACAACTATGGGCTTGGAGTTCAGTCACCAAGCAGGGTTGGGGCGTCACTTAGCACGGCCGCGACTAGCGCCGGAAGTCTGCTGTCAAGCGCAGGCACGGCAGTTGCATCACTATACAATCGAATCAAAAATCAAATAGGAATCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9d7706773adfa4e5c33870ba4ecc6608afefb9d560c461ceac0eca21857fdd23
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7256
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage therapy in agriculture - a green tech approach to combat plant pathogenic bacteria Carstens,A.B., Djurhuus,A.M. and Hansen,L.H. 2021 — GenBank