Protein

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Genbank accession
XPO97991.1 [GenBank]
Protein name
terminase large subunit
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MEQPINALNDFHPLNEAGKILIKHPSLAERKDEDGIHWIKSQWDGKWYPEKFSDYLRLHKIVKIPNNSDKPELFQTYKDKNNKRSRYMGLPNLKRANIKTQWTREMVDEWKKCRDDIVYFAETYCAITHIDYGVIKVQLRDYQRDMLKIMSSKRMTVCNLSRQLGKTTVVAIFLAHFVCFNKDKAVGILAHKGSMSAEVLDRTKQAIELLPDFLQPGIVEWNKGSIELDNGSSIGAYASSPDAVRGNSFAMIYIDECAFIPNFHDSWLAIQPVISSGRRSKIIITTTPNGLNHFYDIWTAAVEGKSGFEPYTAIWNSVKERLYNDEDIFDDGWQWSIQTINGSTLAQFRQEHTAAFEGTSGTLISGMKLAIMDFIEVTPDDHGFHRFKSPEPDRKYIATLDCSEGRGQDYHALHIIDVTDDVWEQVGVLHSNTISHLILPDIVMRYLVEYNECPVYIELNSTGVSVAKSLYMDLEYEGVICDSYTDLGMKQTKRTKAVGCSTLKDLIEKDKLIIHHRATIQEFRTFSEKGVSWAAEEGYHDDLVMSLVIFGWLSTQSKFIDYADKDDMRLASEVFSKELQDMGDEYAPVIFVDSVHSAEYVPVSHGMSMV
Physico‐chemical
properties
protein length:610 AA
molecular weight: 69712,39400 Da
isoelectric point:5,52796
aromaticity:0,10492
hydropathy:-0,33836

Domains

Domains [InterPro]
G3DSA:3.40.50.300:FF:001414
Unmapped
60–313
G3DSA:3.40.50.300:FF:001414 G3DSA:3.30.420.240
IPR027417
STR
60–313
IPR027417 G3DSA:3.30.420.240
IPR027417
STR
60–305
IPR027417 IPR035421
IPR044267
Unmapped
104–562
IPR044267
IPR027417
STR
135–299
IPR027417
PF03237
STR
158–370
PF03237
XPO97991.1
1 610
Architecture
STR
RBD
STR 60-370 | RBD 371-572 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage SF2-1
[NCBI] 		3385253 Viruses >
Host Shigella flexneri
[NCBI] 		623 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPO97991.1 [NCBI]
Genbank nucleotide accession
PQ571308.1 [NCBI]
CDS location
range 156611 -> 158443
strand -
CDS
ATGGAACAACCGATTAACGCATTAAATGATTTCCATCCATTAAATGAAGCTGGAAAAATTTTAATAAAACACCCAAGCTTAGCTGAAAGAAAAGATGAAGATGGAATTCATTGGATAAAATCTCAGTGGGATGGAAAATGGTATCCTGAAAAATTCAGTGATTATCTTCGTCTACACAAGATAGTAAAAATTCCAAATAATTCGGATAAGCCTGAATTATTTCAAACCTATAAAGATAAGAATAATAAAAGATCTCGGTATATGGGTCTTCCTAACCTGAAACGAGCTAATATTAAAACACAATGGACTCGTGAAATGGTTGATGAGTGGAAAAAATGTCGAGACGATATTGTTTATTTTGCAGAAACATACTGTGCCATTACTCATATTGACTATGGTGTCATAAAGGTTCAATTACGTGACTATCAGCGTGATATGCTCAAAATAATGTCATCTAAACGTATGACTGTTTGTAATCTATCGCGCCAGCTCGGTAAAACAACTGTAGTAGCTATTTTCCTTGCACACTTTGTATGTTTTAACAAGGATAAAGCTGTAGGTATTCTTGCGCACAAAGGCTCAATGTCTGCGGAAGTTTTAGATCGTACTAAGCAAGCAATTGAACTGCTTCCTGACTTTTTACAACCAGGAATTGTTGAATGGAATAAGGGGTCAATTGAACTAGATAATGGTTCTTCAATTGGTGCTTATGCTTCCTCTCCTGACGCAGTTCGTGGTAACTCGTTCGCAATGATTTACATTGACGAATGCGCATTTATTCCAAACTTCCATGATTCCTGGCTTGCTATTCAGCCAGTAATTTCATCTGGTCGTCGTTCGAAAATTATTATTACTACGACTCCTAATGGATTAAATCATTTTTATGATATTTGGACTGCTGCTGTCGAAGGTAAATCAGGTTTTGAACCATATACTGCTATTTGGAATTCAGTTAAAGAACGTCTTTATAATGATGAAGATATTTTTGACGATGGATGGCAATGGAGCATACAAACCATTAATGGTTCTACTTTAGCTCAATTTCGTCAAGAACACACTGCAGCGTTTGAAGGGACTTCTGGTACATTAATTTCAGGAATGAAATTAGCTATTATGGATTTCATTGAAGTAACTCCAGATGATCATGGTTTTCATCGATTTAAAAGCCCTGAACCAGATAGAAAATATATTGCAACTCTAGACTGCTCAGAAGGTCGTGGGCAAGATTACCACGCTTTACATATTATTGATGTTACTGATGATGTGTGGGAACAGGTTGGTGTTTTACACTCAAACACTATTTCTCATTTAATTCTACCTGACATCGTTATGCGTTATTTAGTAGAATACAATGAATGCCCAGTTTATATTGAATTAAATAGTACTGGTGTGTCAGTTGCGAAATCACTTTATATGGATTTAGAATACGAAGGTGTTATCTGCGATTCATATACTGATTTAGGAATGAAGCAAACTAAACGAACGAAAGCAGTAGGATGCTCTACATTAAAAGACCTTATTGAAAAAGATAAGCTTATTATTCATCACCGTGCAACTATTCAAGAGTTTAGAACGTTTAGTGAAAAAGGCGTGTCTTGGGCGGCTGAAGAAGGTTATCACGACGATTTAGTAATGTCTTTAGTAATTTTTGGATGGTTATCAACACAATCAAAATTTATTGATTATGCTGACAAAGATGACATGCGATTAGCATCTGAAGTGTTTTCAAAGGAACTTCAAGATATGGGTGATGAATACGCTCCAGTTATATTTGTTGATTCGGTTCATTCTGCTGAGTATGTTCCAGTATCTCATGGTATGTCAATGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dee689e762f4df79c2ba224141e479c79eaa450d1ef8d759886d99b17df6976c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7696
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50