Protein

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Genbank accession
WNO49177.1 [GenBank]
Protein name
putative collar
RBP type
TF
Evidence RBPdetect
Probability 0,91
Protein sequence
MARLLTLRRNLARLLTRDEVDDNFVNVASDFSGAVDPATLTGAYVAPYMRWADTGTGWLKRRNSANDGWVSEQRLLRRTVQPFNTSELPTADGGPIYVNGQGMAEFDAAAGKYRVVSPVPVGAVAWWPLRSSMPAGRIPADGQTISRATFPDLAAMVLAGTVPLATEADWLADPRNRGCYTAGDGSTTIRVPDLNGRSSGSLGRVFLSGDGMDAAPVGVIQPDQFQNHGHLINIKTSQGGSPAEYGTVPYGQGANSQYSTVDAPVQNGAPNGVPRVGNKTHPQNVAGAWTIQAFGAVTNPGAADAAQLATDYATLNAAFQTMRGQVFGFNQTWQNVAASRSLGVIYTNTTGRPILVQVYTTSTAAAGYLFFAIDETPAGLVYYPNSAANLPGCILVPAGSTYRASTTNASLSGWREYR
Physico‐chemical
properties
protein length:418 AA
molecular weight: 44245,84580 Da
isoelectric point:7,73877
aromaticity:0,09091
hydropathy:-0,19426

Domains

Domains [InterPro]
SSF88874
STR
114–295
SSF88874
IPR037053
ATT
117–199
IPR037053 DC_2049
DC_1514
STR
120–230
DC_1514
WNO49177.1
1 418
Architecture
ATT
STR
ATT 117-199 | STR 200-415 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage CF418P1
[NCBI] 		3043583 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Achromobacter sp.
[NCBI] 		134375 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNO49177.1 [NCBI]
Genbank nucleotide accession
OQ817832 [NCBI]
CDS location
range 1 -> 58030
strand +
CDS
ATGGCCCGATTGCTCACCCTGCGCCGCAACCTGGCGCGCCTCCTGACCCGCGACGAGGTCGACGACAATTTCGTCAACGTCGCTTCGGACTTCTCCGGCGCCGTGGACCCTGCGACGTTGACGGGCGCCTACGTCGCCCCGTACATGCGCTGGGCGGACACCGGGACCGGCTGGCTCAAGCGCCGCAACTCGGCAAATGACGGATGGGTGTCGGAACAGCGGCTGCTGCGCCGCACTGTGCAACCGTTCAACACGAGCGAGCTGCCCACGGCGGACGGCGGGCCCATCTATGTCAACGGGCAAGGCATGGCCGAGTTCGACGCCGCGGCGGGCAAATACCGCGTTGTATCTCCGGTACCGGTGGGGGCGGTGGCCTGGTGGCCACTGCGCTCGTCCATGCCGGCAGGCCGGATCCCTGCGGATGGCCAGACCATTTCGCGCGCTACCTTTCCCGACCTTGCCGCCATGGTGCTGGCCGGCACTGTGCCATTGGCCACGGAAGCCGATTGGTTGGCAGACCCACGCAACCGTGGCTGCTATACCGCCGGTGACGGCTCGACCACGATCCGGGTGCCCGACCTCAACGGCCGTTCCTCCGGCTCTCTCGGGCGCGTGTTCCTCTCCGGTGACGGCATGGACGCAGCCCCAGTGGGTGTGATTCAGCCGGACCAGTTCCAGAATCACGGTCACCTCATCAACATCAAGACCTCACAGGGTGGTTCCCCTGCGGAATACGGCACCGTCCCGTATGGGCAGGGGGCCAACAGCCAGTACAGCACGGTCGATGCCCCGGTCCAGAACGGAGCCCCCAATGGGGTGCCGCGTGTGGGCAACAAGACGCACCCGCAGAACGTCGCCGGTGCATGGACTATCCAGGCCTTCGGCGCCGTCACCAATCCTGGCGCGGCCGACGCTGCGCAGCTGGCGACCGACTATGCGACGCTCAATGCGGCATTTCAAACTATGCGCGGCCAAGTGTTTGGCTTCAATCAGACATGGCAGAACGTCGCTGCTTCGCGGTCTTTGGGTGTGATCTACACGAACACGACAGGGCGGCCAATCCTCGTCCAGGTCTATACCACTTCGACCGCCGCAGCGGGCTACTTGTTCTTTGCCATCGACGAAACCCCGGCCGGCTTGGTCTATTACCCGAATAGCGCGGCGAATTTGCCTGGCTGCATCCTGGTCCCAGCAGGTTCGACATATCGGGCAAGTACAACTAATGCGAGCCTGAGCGGCTGGAGGGAGTATCGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ba50c475e84eb60827d86b9451148a8afde44b76ebb072355673744b709b8e21
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7467
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Compounding Achromophages for therapeutic applications Cobian-Guemes,A.G., Le,T., Rojas,M.I., Villela,H., McNair,K., Hung,S.-H., Han,L., Boling,L., Octavio,J.C., Dominguez,L., Cantu,V.A., Archdeacon,S., Vega,A.A., Jacobson,N., An,M., Hajama,H., Burkeen,G., Edwards,R.A., Conrad,D., Rohwer,F. and Segall,A.M. 2006 — GenBank