Protein

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Genbank accession
AUR81762.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MSSLNDLLGAATQQESGTGVTESGTVVIGSTTAGEPTEIQTSSGETVVTVTDDGGFQLSESQVVRQIVNVINTGDDDNDMKLPTVQAVMTFLAGAVTATIDFAEFTSKADFDSFISTGGFIPTIVFVTDTTPFDYTDNTGHTGTDLTWMFVVCVEEDSVITTSMINNSDISSLTGDEIASIISSTEDVNFVNDSDLSRIRNLPDNTADALGGKVNTEAGKGLSQNNFTDAQRSKVDNSPSDTNTELGNKLDKQSTGVNVRVTNTGSGSGTYEIENTTGDLDERLWRLKVKSTGSMVIEALDDGGGVTETFELDQSGAIKAKTMKQNNYSVVATNDPMYVLLSAMFGVGSLTQDVVLQSDSSSVITLKVADNADSNGVAWQNTGSSYTMSVRRESVGSFTSDLVVSMGLDNDVDQLTEVMRVRCDDGDSDTRLSLMVKALHAEGDITSNGNVMINSKNLGVQRDVVTYKSSHPTISAITLSAYFAAEAEVEFLGTSSGSINMPVISTDPASDEVQAGTEISFCNFNSGSSADTTLVAPDSDHVFMVGNVGNVFTGSTVIQNASQVRIKARDYRSYSGIGKMCYVVVSA
Physico‐chemical
properties
protein length:587 AA
molecular weight: 62072,54610 Da
isoelectric point:4,15336
aromaticity:0,05792
hydropathy:-0,16286

Domains

Domains [InterPro]
DC_1916
STR
9–587
DC_1916
AUR81762.1
1 587
Architecture
STR
STR 9-587
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR81762.1
1 587
Domain Start End Length (AA) Confidence
N-terminal 1 265 265 0,9797
Central domain 266 464 200 0,0770
C-terminal 465 587 122 0,9956
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-265
Central
266-464
C-terminal
465-587

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.013.O._10N.286.54.F9
[NCBI] 		1881244 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR81762.1 [NCBI]
Genbank nucleotide accession
MG592398 [NCBI]
CDS location
range 11791 -> 13554
strand +
CDS
ATGAGTAGCTTAAATGACCTTCTAGGCGCAGCAACGCAGCAAGAGTCAGGCACTGGTGTAACGGAGTCGGGTACAGTTGTAATTGGCTCAACTACAGCGGGCGAGCCTACAGAGATACAAACAAGCTCAGGCGAAACCGTTGTAACTGTTACCGATGATGGCGGATTTCAATTATCTGAATCTCAAGTTGTTCGCCAGATTGTTAATGTGATCAATACGGGTGACGACGATAACGATATGAAGTTGCCAACCGTTCAGGCTGTAATGACATTCTTAGCTGGCGCAGTAACTGCAACTATCGACTTCGCTGAGTTCACAAGCAAGGCGGATTTCGATTCGTTCATTAGTACGGGTGGTTTTATTCCAACTATCGTCTTTGTGACTGATACTACACCTTTCGATTACACCGACAATACTGGACATACAGGAACAGATTTAACGTGGATGTTTGTCGTATGTGTCGAAGAAGATAGCGTCATTACAACTTCAATGATTAACAATAGCGACATTTCAAGCCTAACCGGTGATGAGATTGCCAGCATCATTTCGTCAACTGAAGACGTTAACTTTGTTAACGATTCTGACCTATCTCGAATCCGAAATCTACCGGATAACACAGCTGACGCGTTAGGCGGCAAAGTAAACACTGAAGCGGGAAAGGGACTATCACAGAACAACTTCACAGACGCGCAGCGTAGTAAGGTTGATAACTCGCCATCTGATACTAATACCGAGCTAGGTAATAAGCTGGACAAGCAAAGTACTGGTGTAAACGTTCGAGTGACAAACACCGGATCAGGAAGTGGCACTTATGAGATAGAAAACACAACAGGAGACTTAGATGAAAGGCTTTGGCGGCTAAAAGTTAAATCAACTGGCTCGATGGTTATTGAAGCTCTAGATGATGGTGGAGGTGTTACTGAGACGTTTGAGCTTGACCAGTCAGGCGCAATCAAAGCCAAGACCATGAAGCAAAATAACTACTCTGTTGTCGCGACGAATGACCCTATGTATGTTCTTTTGTCCGCAATGTTTGGCGTTGGATCTCTAACTCAGGATGTGGTTTTGCAGTCAGACAGCAGCTCAGTGATTACGCTTAAGGTTGCTGATAACGCAGACTCTAACGGCGTAGCTTGGCAAAATACCGGATCTTCTTACACGATGAGCGTTAGGCGCGAATCTGTTGGGTCATTCACATCTGACTTAGTTGTCTCGATGGGGCTTGATAATGACGTAGATCAGTTAACGGAAGTTATGCGCGTTCGATGTGATGATGGTGATAGTGATACGCGACTTTCACTCATGGTAAAGGCATTACATGCGGAGGGTGATATTACCTCCAATGGAAACGTGATGATTAACTCTAAAAACCTTGGCGTACAAAGGGACGTTGTAACCTATAAGAGTAGCCATCCGACTATTAGCGCAATTACTCTTTCCGCATACTTTGCTGCTGAGGCTGAGGTTGAGTTTCTTGGCACAAGTTCAGGGTCAATTAACATGCCTGTAATTTCAACAGATCCAGCAAGCGATGAAGTGCAAGCGGGAACTGAGATTAGTTTCTGTAACTTCAACTCTGGCTCATCTGCTGATACAACACTTGTGGCTCCAGATTCTGACCACGTATTTATGGTTGGCAATGTAGGCAATGTGTTTACCGGATCAACTGTCATCCAGAATGCTAGTCAGGTTCGAATTAAAGCGCGAGATTATAGGAGCTATAGCGGCATAGGAAAGATGTGCTACGTGGTGGTTTCAGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0d4e34f254d903785a970f2518f4b87a7e4aa90e78f8219d4bb6e49f5527b6ae
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6313
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank