Protein

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Genbank accession
AWY02818.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MPFLISGTITNNGNPVSVPVVAFSTTVPSILLGSTVSAADGKYTISELEYKGSAIVVAYSNGGTLFNPTTVVLTDDIISPVPANGYVYRALNPGTLGNVEPEWATDNNVISGDVTLEPIQVFAPSAAGYENTLFYMPDSVQYKGRNLVRGTSAVVGGKTYYAYSDTNDPTYIGYFDELIRPLSITQLNVVNADFETGDLSNWQTTKGTPDVREIARGDDVRNVVYGAATLEWGVSQQISLPILLSQIGYPTDAIPFLFDNVTITLKVAQSSYNNSDPAQQYIRLIDSNNSEISFESNDLKTESSLEWVERTVSISANSNMDLNAIEVELYGYRTNGSNNDGYTTSVRVEVVANE
Physico‐chemical
properties
protein length:354 AA
molecular weight: 38353,97080 Da
isoelectric point:4,18400
aromaticity:0,09605
hydropathy:-0,13616

Domains

Domains [InterPro]
G3DSA:2.60.120.260
STR
185–348
G3DSA:2.60.120.260
G3DSA:2.60.120.260
STR
186–348
G3DSA:2.60.120.260
AWY02818.1
1 354
Architecture
STR
STR 185-348 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AWY02818.1
1 354
Domain Start End Length (AA) Confidence
N-terminal 1 219 219 0,7692
Central domain 220 343 125 0,1482
C-terminal 344 354 10 0,9900
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-219
Central
220-343
C-terminal
344-354

Taxonomy

  Name Taxonomy ID Lineage
Phage Alteromonas phage JH01
[NCBI] 		2249314 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Alteromonas marina
[NCBI] 		203795 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AWY02818.1 [NCBI]
Genbank nucleotide accession
MH445500 [NCBI]
CDS location
range 19617 -> 20681
strand +
CDS
ATGCCGTTTTTGATTTCAGGCACGATAACTAATAACGGCAATCCTGTAAGTGTACCAGTGGTGGCGTTTTCCACCACTGTACCTTCGATATTGCTAGGGTCAACTGTTAGTGCTGCTGATGGTAAATACACTATATCTGAACTTGAATATAAAGGGTCTGCAATTGTAGTAGCGTACAGTAACGGCGGCACGCTTTTTAATCCTACAACAGTGGTTTTGACAGATGATATAATTTCACCTGTACCAGCAAACGGGTATGTATACAGAGCATTAAACCCCGGCACGCTAGGTAATGTTGAACCTGAATGGGCTACTGACAATAATGTAATAAGCGGTGACGTAACACTTGAACCCATTCAGGTATTTGCACCGTCTGCGGCAGGTTATGAAAATACTTTATTCTACATGCCTGATTCAGTTCAGTACAAAGGGCGAAACTTAGTACGTGGTACAAGTGCGGTTGTTGGTGGTAAGACTTACTACGCATATAGCGATACTAACGACCCTACCTACATAGGTTATTTTGATGAACTCATACGACCATTATCTATAACTCAATTAAATGTAGTAAACGCTGATTTTGAAACAGGCGACCTTTCAAATTGGCAAACCACGAAAGGGACACCTGACGTTAGGGAAATCGCAAGGGGTGACGATGTTCGCAACGTGGTGTACGGTGCTGCCACGTTAGAATGGGGGGTATCGCAACAAATTTCGCTGCCAATATTACTATCACAAATTGGTTATCCCACAGACGCTATACCGTTTTTATTCGACAACGTTACGATCACATTGAAAGTGGCTCAGTCTTCTTACAATAATAGTGACCCCGCACAACAGTACATAAGGTTAATAGATTCTAACAACAGTGAAATCAGCTTTGAATCTAATGATTTAAAAACTGAATCTAGTCTTGAATGGGTGGAGCGTACCGTATCTATTAGCGCTAATAGCAATATGGATTTAAACGCTATCGAAGTCGAACTGTACGGCTATAGGACTAACGGTAGCAACAATGATGGGTATACTACTAGCGTTCGTGTAGAAGTGGTCGCTAATGAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
44f39a2cddea2f6de08203c9ab32de9e58f6cf9dfa7a44b1b29a161794297ec1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7955
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genetic Analysis of a Novel Alteromonas Phage JH01 from the Yellow Sea Xiao,S. 2019-08-01 — GenBank