Protein

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Genbank accession
QPI17859.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MNNTINHISDKAIYVKFDPTGTQWPSTVLNVQQALADIAPYARQSIGLPSATEAVSGVAMIATEADIDAGLDNTKIVTPKLLAYRLGNPRATQTIWGYTRYATDAELGNITNDSVSVTPRGLDWIFNNRLATEDSRGSAKISTTLQATAGTDNTTVMTPLKVKQAISALVPVQADATESNSGLVRLATIAQVRAGTIRDGFAISPYTFNRLNATETDLGILRIATNGQVSAGVDDSTAITPLKLQNLKANTTNFGIVRLSQTTGNIANTALAANANVVSTDKSSVVNAGAEIYHGSATEQNRYITKRDLTSNFGIGDIWTSARQTDRENAYICDGRGLNTTEFAELFSVIGYTFGGEGSTFNIPDMRGEFVRGHDRGKGVDVGRSFGSKQTDAMQPITGEFVVDDMTIAELINPSDPNDKRRRYPNGCFIFRNYTRGFGYDAKSDRPWEAPLITFDSSLQTRTASETRPRNIALNYLILVK
Physico‐chemical
properties
protein length:481 AA
molecular weight: 52067,52370 Da
isoelectric point:6,05264
aromaticity:0,07484
hydropathy:-0,30000

Domains

Domains [InterPro]
DC_0176
STR
1–400
DC_0176
IPR037053
ATT
302–367
IPR037053
SSF88874
STR
304–478
SSF88874
IPR011083
ATT
318–371
IPR011083
QPI17859.1
1 481
Architecture
STR
ATT
STR
STR 1-301 | ATT 302-371 | STR 372-478 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage POP12
[NCBI] 		2741065 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pectobacterium carotovorum subsp. carotovorum
[NCBI] 		555 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Pectobacterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPI17859.1 [NCBI]
Genbank nucleotide accession
MT560058.1 [NCBI]
CDS location
range 48239 -> 49684
strand +
CDS
ATGAATAATACTATTAACCACATAAGCGACAAAGCAATTTATGTGAAGTTTGATCCAACAGGAACACAATGGCCTAGCACAGTTTTAAACGTTCAGCAGGCTTTGGCCGATATCGCTCCTTATGCGCGTCAAAGTATAGGTTTACCGTCTGCTACAGAGGCCGTTTCTGGTGTTGCTATGATAGCAACAGAGGCTGATATTGATGCAGGTTTGGATAACACAAAAATCGTTACTCCTAAATTGCTTGCATATAGATTAGGAAATCCAAGAGCAACGCAAACAATATGGGGATATACCAGATATGCAACCGACGCAGAATTAGGAAATATTACAAACGACAGTGTTTCTGTAACTCCGCGTGGTTTGGACTGGATTTTTAATAACAGATTAGCAACGGAAGATTCAAGAGGATCTGCGAAAATTTCTACAACTTTACAGGCGACAGCAGGAACAGACAATACAACTGTAATGACTCCGCTTAAAGTTAAACAAGCAATTTCCGCATTGGTTCCGGTTCAAGCAGACGCAACAGAATCTAATTCAGGTTTGGTTCGTTTGGCAACGATTGCACAAGTAAGAGCAGGCACTATCCGCGATGGATTTGCTATTTCTCCTTATACGTTCAATCGTCTTAATGCAACAGAAACAGATCTAGGTATTTTGCGTATTGCAACAAATGGACAAGTAAGCGCTGGTGTTGATGATAGCACTGCTATTACTCCTTTGAAATTACAGAACCTTAAAGCAAACACAACGAATTTCGGTATTGTTCGTTTGTCTCAGACAACAGGAAATATTGCAAACACCGCACTTGCAGCAAACGCAAACGTTGTTTCTACTGATAAGTCGAGTGTAGTTAATGCAGGTGCTGAAATATATCACGGTAGCGCGACCGAACAAAATCGCTATATAACAAAACGAGATCTTACGAGTAATTTCGGTATAGGTGATATTTGGACAAGTGCTAGACAGACAGACCGAGAAAATGCATATATTTGTGATGGTCGCGGATTAAACACAACAGAATTTGCAGAACTTTTTTCTGTCATAGGGTATACATTTGGCGGCGAAGGAAGCACGTTTAATATTCCTGATATGAGGGGAGAATTTGTTCGAGGTCATGATCGCGGTAAAGGTGTTGATGTAGGAAGGTCTTTCGGTTCTAAACAAACAGATGCGATGCAACCAATAACAGGAGAATTTGTTGTCGATGATATGACTATTGCAGAACTGATTAATCCGTCAGATCCTAACGATAAAAGAAGAAGATATCCTAACGGATGTTTCATTTTTAGGAATTATACGAGAGGTTTCGGTTATGATGCTAAATCGGACAGGCCATGGGAAGCTCCATTGATAACTTTCGATTCTTCTTTACAGACAAGAACGGCTTCTGAAACCAGACCTAGAAATATCGCATTGAATTATCTCATTTTAGTTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
316a9fe89c02a1e38a87aeb7baddc3a45f5042fc2908e2d1391fda98f4ccf3e6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7296
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50