Protein

View in Explore
Genbank accession
YP_011898367.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,59
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MDNIRIAILSANNTPVAFMDNQHKKSMHYWGDELHEYLQGAANTYTFTVSAKHQDAENVTAGNKVAFIRKGKSYYLNIVNTEQTEQTITATAWSLSFELINEDAGEYKAGKAMSFEEYLAVFDAERTLKLGLNEVSDKRITNEWTGTTSVLKRLFSLANVFSAEIEFETVLNSDYSLKEIVLNVYRKHSDTDSGVGEYRNDIVLRYGKGITGIRKTTDAEKLYTCIQPTGKDGLTINGLDKKEYDENGNIEYFTDGAIIRAPQARDRFPSNIVNKADAYILMRKEYDTDSKDKLYSMALSDLKTASEPVVTYEVDGYFDTNIGDTVRMQDQEWTPVLYLQARVSEQIRSLTNPKTAKTVFTNYKELTSEISDSLLQRMQDLINKNKVYTCSISTNNGIIFKNGIGSTTLTAYAYDNGVDVTGNLEIRWSKDGTEFYVGKSVTVNATDVDTKAVYSFEAMENGIKRGYYEVTIADLMDGEDGKDGEQGPQGEKGEQGEQGPPGPQGAPGLDGIQGPKGDQGIPGKDGKDGKTQYTHIAYANSADGRTDFSVSDSNREYIGMYVDFAQNDSADPTKYAWSKIKGTDGAIGTPGKPGADGKTPYLHIAYANSADGKTGFSTTDGTNKLYIGQYTDYTQADSTDATKYTWTKIKGEQGEQGPQGVPGLQGVQGPKGEQGIQGPKGDTGAAGVNYWRSSATIDLSDTKTYDVNKWYPVVGSQLPTSVYNRILVNVSLNSGTKPSWSTHVSGFSVNLDLASIGSGWGTTSGECIIYADTYSFCSVSPASYTQLTYGSIPVLYLRGGGKYFVKTDFVVNWTPKPTGYTWQNGNYKQTAPVLDSRPVPSGTNIKGKSTYFHIKYSAVSNPTTSNQMTEIPNTYIGTYVDFTREDSTDPKKYTWSRFQGAQGPQGTQGIPGTNGTNGKTSYLHIKYSNDGGKTFTGNSGEDVGTHIGTCVDYNQSDPASVGSYKWAKIKGEQGATGPQGATGATGPQGATGNGIRSITNYYLATASGSGVSASTSGWTTTVQAITASKKYLWNYEVVTYTNGSTYQSAPCIIGAYGDKGATGATGATGPSGIIVSSTAPSNPKVGQLWQTASGEPIKRWDGSRWVIHYISVDNLNAQTLSAIAADLGTVTAGLIKDKNGTMLIDVTSGKIISKKIVQGAVENVASLSNAYLDFSGKAPTTDRATMSVNLQNIMFTNENTGKATTIQFEDEMIYARNSVSPRISIYAYRNYDSGTVKGPYTSTNSANNIRVELKRRGCMVTCNITMLAQFPNSGSFGAFDEVRIPIGYRPVLDIRTPYNEVSGSSIFGTGRYIIGKDGGITIYVNNPNWTERHLSTTWITED
Physico‐chemical
properties
protein length:1342 AA
molecular weight: 145782,71290 Da
isoelectric point:5,61947
aromaticity:0,09985
hydropathy:-0,52258

Domains

Domains [InterPro]
DC_0266
STR
1–743
DC_0266 DC_1328
IPR010572
ENZ
139–365
IPR010572 IPR008160 G3DSA:1.20.5.320
IPR050149
Unmapped
477–1072
IPR050149
G3DSA:1.20.5.320
STR
499–549
G3DSA:1.20.5.320 DC_1328
YP_011898367.1
1 1342
Architecture
STR
STR
STR 1-743 | STR 762-1332 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_011898367.1
1 1342
Domain Start End Length (AA) Confidence
N-terminal 1 686 686 0,9706
Central domain 687 991 306 0,4650
C-terminal 992 1342 350 0,3987
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-686
Central
687-991
C-terminal
992-1342

Taxonomy

  Name Taxonomy ID Lineage
Phage Ruminococcus phage phiRg507T2_3
[NCBI] 		2772518 Uroviricota > Caudoviricetes > Munstervirinae > Ahaonvirus 507T23 >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_011898367.1 [NCBI]
Genbank nucleotide accession
NC_104263.1 [NCBI]
CDS location
range 13596 -> 17624
strand +
CDS
GTGGATAACATCAGGATCGCGATTTTAAGCGCGAATAACACACCAGTAGCGTTTATGGACAATCAGCACAAGAAGTCCATGCACTACTGGGGAGATGAATTGCACGAATACTTACAGGGTGCGGCAAATACTTACACCTTTACGGTGTCCGCAAAGCATCAGGATGCAGAGAATGTTACCGCCGGGAATAAGGTGGCGTTTATACGCAAAGGGAAATCCTACTATCTAAACATCGTAAACACTGAGCAGACAGAGCAGACGATTACTGCCACGGCGTGGTCACTGTCGTTTGAGTTAATCAATGAGGATGCCGGCGAATACAAAGCTGGAAAAGCAATGAGCTTTGAGGAGTACCTTGCCGTATTTGACGCGGAGAGGACACTTAAATTGGGTCTCAACGAGGTGTCAGATAAGCGGATCACCAACGAATGGACAGGTACAACGTCCGTATTAAAGAGATTATTCTCCCTGGCTAATGTATTTTCTGCGGAGATCGAGTTTGAGACAGTGCTTAACAGCGATTACTCCTTAAAAGAGATTGTGCTGAATGTATATCGGAAACACTCCGATACAGACAGCGGAGTCGGAGAATACCGGAATGACATTGTACTGCGGTACGGGAAAGGAATTACCGGAATTCGAAAAACCACAGATGCCGAGAAGCTTTACACCTGCATCCAGCCGACCGGGAAAGACGGGCTGACGATCAATGGACTGGACAAAAAAGAATACGATGAGAACGGGAATATCGAGTACTTTACAGACGGCGCAATCATCCGGGCACCACAGGCAAGAGACCGGTTCCCATCCAACATCGTAAATAAGGCTGATGCTTATATCCTGATGCGTAAAGAGTACGATACAGACAGCAAGGACAAGCTCTATAGCATGGCTCTGTCTGATCTTAAAACAGCATCTGAACCGGTGGTGACTTACGAGGTGGACGGATATTTTGACACCAACATCGGGGATACGGTAAGGATGCAGGATCAGGAGTGGACACCAGTCCTTTATCTACAGGCAAGAGTATCAGAACAGATCAGGAGTCTTACCAATCCCAAAACTGCAAAGACGGTATTTACAAACTACAAAGAGCTGACATCGGAAATTTCGGACAGCTTATTACAGAGGATGCAAGACCTTATTAATAAAAATAAGGTTTATACTTGTTCCATCTCCACCAACAATGGCATCATCTTTAAAAATGGTATCGGCAGCACTACTCTGACAGCTTACGCTTACGATAACGGCGTGGACGTCACGGGCAATCTGGAAATCCGGTGGAGTAAAGATGGGACAGAGTTTTACGTTGGCAAGAGTGTTACGGTAAATGCTACGGACGTGGATACAAAGGCGGTGTACTCGTTTGAGGCTATGGAAAATGGGATAAAACGTGGGTATTACGAGGTTACGATTGCAGATTTAATGGATGGAGAGGACGGAAAAGACGGGGAACAGGGTCCGCAAGGTGAGAAAGGAGAGCAAGGCGAACAGGGACCTCCGGGACCACAAGGCGCTCCGGGATTGGATGGTATACAGGGTCCAAAGGGGGATCAGGGAATCCCGGGAAAAGATGGGAAGGACGGAAAAACACAGTACACCCACATCGCCTATGCGAACAGCGCAGACGGTAGGACAGATTTTTCCGTGTCCGACAGTAATAGGGAATATATCGGAATGTATGTTGATTTTGCGCAAAATGACAGCGCAGACCCGACAAAATACGCATGGAGTAAGATCAAAGGCACAGACGGGGCGATCGGAACACCCGGAAAGCCGGGAGCTGATGGAAAGACCCCGTATCTACATATCGCCTACGCAAACAGTGCAGATGGCAAGACGGGATTTTCCACCACGGATGGTACAAATAAGCTCTATATCGGGCAGTATACAGATTATACACAGGCAGATAGTACAGATGCTACGAAGTATACATGGACAAAAATAAAAGGCGAACAGGGGGAACAAGGTCCGCAGGGAGTTCCCGGTCTGCAAGGAGTGCAAGGTCCCAAAGGTGAACAAGGGATACAGGGTCCCAAAGGAGATACTGGAGCTGCAGGTGTAAACTACTGGAGATCATCAGCAACGATAGACTTATCTGATACTAAAACTTACGATGTAAATAAATGGTATCCCGTTGTGGGGAGTCAGCTTCCAACGAGTGTTTATAATCGTATTTTGGTTAATGTGTCTTTAAATAGTGGAACAAAACCATCCTGGAGTACACATGTTAGCGGATTCTCGGTGAATTTAGATCTGGCTTCCATTGGATCTGGGTGGGGAACTACTTCTGGCGAATGTATTATTTATGCAGACACGTATTCATTCTGTTCAGTGTCGCCTGCCAGCTATACACAACTGACTTATGGATCAATCCCTGTATTATATTTAAGAGGTGGCGGTAAATATTTTGTAAAGACTGATTTTGTGGTCAACTGGACGCCTAAGCCAACAGGATATACATGGCAGAATGGAAATTATAAGCAGACAGCACCTGTCTTAGATAGCAGACCTGTACCAAGCGGAACCAATATTAAAGGGAAGAGCACCTATTTTCACATCAAGTATTCCGCAGTATCGAATCCAACCACCTCTAACCAGATGACAGAGATACCTAACACATATATTGGTACTTACGTAGACTTCACACGGGAAGATAGCACGGATCCAAAGAAATATACCTGGTCACGTTTCCAAGGAGCCCAGGGTCCCCAGGGAACGCAGGGAATTCCGGGAACAAACGGCACAAACGGCAAGACAAGTTATCTGCACATTAAATATTCCAATGATGGAGGAAAAACGTTTACCGGAAACAGCGGAGAAGATGTGGGAACGCATATCGGTACTTGTGTGGATTACAATCAGTCCGATCCTGCAAGTGTTGGATCTTATAAGTGGGCGAAGATTAAAGGAGAACAAGGTGCTACAGGACCGCAAGGGGCAACTGGCGCAACGGGGCCGCAAGGAGCAACTGGAAACGGAATAAGGTCTATCACGAATTATTATCTTGCAACGGCAAGCGGAAGCGGTGTGTCGGCGTCCACATCAGGATGGACTACAACTGTACAAGCAATAACGGCGTCAAAAAAATATCTGTGGAATTATGAAGTTGTTACCTATACAAATGGCAGCACGTATCAATCAGCACCATGTATCATCGGAGCATATGGTGATAAGGGAGCGACAGGTGCTACAGGAGCAACAGGACCAAGTGGCATAATTGTATCTTCTACGGCTCCGTCAAATCCTAAAGTTGGCCAGTTATGGCAGACAGCAAGTGGAGAGCCGATTAAGAGATGGGATGGAAGTAGGTGGGTGATCCATTATATTTCTGTTGATAACTTAAACGCACAGACTTTAAGTGCGATAGCGGCAGATCTTGGAACTGTAACTGCCGGACTTATTAAGGATAAGAATGGAACAATGCTTATCGATGTTACATCCGGAAAGATTATTAGCAAGAAAATCGTGCAAGGAGCAGTGGAAAATGTTGCGTCATTGAGTAATGCGTATTTGGATTTCTCCGGTAAGGCTCCGACAACAGATCGAGCTACTATGAGCGTGAACTTGCAAAACATCATGTTTACAAATGAAAATACGGGAAAAGCAACGACAATCCAGTTTGAGGATGAAATGATATATGCAAGAAATTCTGTATCCCCACGTATAAGCATATATGCGTATCGCAATTACGATTCCGGCACCGTGAAAGGTCCATATACAAGCACAAACTCCGCAAATAACATCCGTGTAGAGTTAAAAAGGAGAGGGTGTATGGTAACATGTAATATCACAATGCTTGCACAATTTCCGAACAGCGGAAGTTTCGGAGCGTTTGATGAGGTGCGAATCCCTATTGGGTATCGCCCGGTGCTCGACATCAGAACACCTTACAACGAGGTGTCCGGCTCCTCGATCTTTGGGACCGGTCGATATATAATTGGAAAAGACGGTGGAATTACAATCTATGTCAATAATCCAAATTGGACAGAGCGACATTTGTCTACCACATGGATTACGGAAGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
348c99ca0b5b0bd2c9f14ac0e7a3ac2db8b2e0191a0059e18b9aae4486bb12be
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6949
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Temperate bacteriophages infecting mucin-degrading bacterium Ruminococcus gnavus from the human gut Khokhlova,E.V., Shkoporov,A.N., Draper,L.A., Kingston,A.R., Forde,A., Ross,R.P. and Hill,C. 2023-03-30 — GenBank