Protein

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Genbank accession
YP_010050354.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MARTPDDPTKAQVWVDNTDPLNPKFEFYFPRGAKGETGGIVNPTNIGPGYDWNNLTVSGTYYAAGADLAGQPNSPPSMAIGVNIIVQARNAAIVTQYANTVSNAHSQILFQRSLVSGVWGPWKVFRNTNIDQSGGRAITIWDELNNRSQIFYGDTGWRNIGALLINGWTASAILIRRFGSLVTMKIFNLDGAAFTSTTFVNLPAGFRTAHGSSSFIAVSTSTVNALLVMDANGDCRAQTGITKYGATAYTEISWQTTDTWPATLPGSASGTIPNL
Physico‐chemical
properties
protein length:275 AA
molecular weight: 29506,68560 Da
isoelectric point:7,83357
aromaticity:0,10545
hydropathy:-0,11273

Domains

Domains [InterPro]
cd19958
STR
44–123
cd19958
DC_0134
STR
82–275
DC_0134
YP_010050354.1
1 275
Architecture
STR
STR 44-275
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010050354.1
1 275
Domain Start End Length (AA) Confidence
N-terminal 1 115 115 0,8117
Central domain 116 264 150 0,0043
C-terminal 265 275 10 0,9985
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-115
Central
116-264
C-terminal
265-275

Taxonomy

  Name Taxonomy ID Lineage
Phage Arthrobacter phage Oxynfrius
[NCBI] 		1897429 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010050354.1 [NCBI]
Genbank nucleotide accession
NC_054427 [NCBI]
CDS location
range 1709 -> 2536
strand +
CDS
ATGGCACGCACACCAGATGATCCCACTAAGGCTCAGGTATGGGTCGACAACACCGACCCGCTGAATCCGAAATTCGAGTTCTACTTCCCCCGGGGAGCTAAGGGCGAGACTGGCGGTATCGTGAACCCGACTAATATCGGGCCGGGGTACGATTGGAACAACCTGACCGTATCGGGGACGTACTACGCAGCCGGAGCGGATTTGGCGGGCCAGCCAAACAGTCCACCTTCTATGGCAATCGGCGTGAACATCATTGTTCAGGCTCGCAACGCGGCAATCGTGACCCAGTACGCCAACACGGTCAGCAATGCACACTCTCAGATCCTCTTCCAGCGCTCGCTGGTATCGGGGGTCTGGGGTCCGTGGAAGGTGTTTCGCAACACGAACATCGATCAGTCCGGTGGACGCGCGATCACGATCTGGGACGAGCTGAACAACCGGTCCCAGATATTTTATGGGGATACTGGGTGGCGGAATATCGGGGCGCTCCTGATAAACGGTTGGACCGCATCGGCCATATTGATCCGAAGGTTCGGGTCGTTGGTAACGATGAAGATCTTCAATCTGGACGGCGCAGCGTTCACTTCAACCACGTTTGTTAACTTGCCAGCGGGGTTCCGAACAGCTCATGGTTCCTCATCGTTTATTGCTGTAAGCACCTCGACAGTTAACGCGCTGCTTGTGATGGATGCGAACGGCGACTGCCGCGCTCAAACTGGTATAACCAAGTATGGAGCTACGGCATACACCGAAATTTCGTGGCAGACTACGGACACGTGGCCAGCCACACTGCCGGGTAGCGCGTCCGGAACCATCCCGAACCTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
25a6ed81fc81da4d630ae8c591cd78adee6e4394250d9c451ae91bac1b649816
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8134
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50