Protein

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Genbank accession
QLA10755.1 [GenBank]
Protein name
baseplate wedge subunit and tail pin
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MKQSLNIGNMVDDGTGDYLRQAGLKINNNTDELYFQLGDGTFPHAAGAWKTYSSTQATDIYPVFGQSIAVDTQVARVTVYLPKGSVAKYNQVIRLRDVFGSWQRNPILLVCANTDTIKGSSQPRTINSEFGDLELVYCFPGRWEYVENKRVDRITNSDMATVARKEFIATEGQTDFMDVFGGYDYNPANLEVYHRGNLLYYGGFNSNSDYGSPGTPGQIVPLDNRNIRLKNPCTAGDSVIVVSYMDGVGQWRSSYNRRQITVLDPKKTSLDSVEGARLVQDPSTVKYITIEQFGIESFSPVNPNAFELSINGIMQQEAGTGGQDIYYCEGVTSDNAQDCQLQGGNWVMSNKDYRLEIDPDTLKIIGIHFARDFEHEDIITIVWYNNNIGTTLELDEIINETDNLYISQGADIPVTGAVAITDYNNPGWPNVEKVDDFIGKISSASSLFDFFHPVGTIYENAVNPNNPSTYMGFGQWILWAKGEVLVGWNDDISDPHFAYNNNDLDINGNPSHTAGGTTGQTSTSINNDNLPATKTDKKVLVVDPNGPVIVGGCQYDPDDQGPVYTKYREEQATTNLEHQSVIPMSNIQPSRTVYRWMRVA
Physico‐chemical
properties
protein length:600 AA
molecular weight: 66649,06300 Da
isoelectric point:4,57374
aromaticity:0,10333
hydropathy:-0,44633

Domains

Domains [InterPro]
IPR034695
Unmapped
1–600
IPR034695
IPR036240
STR
1–230
IPR036240 IPR054430 IPR053827
DC_2238
STR
1–580
DC_2238
IPR008987
ATT
2–150
IPR008987 IPR056391
IPR027411
Unmapped
50–148
IPR027411
QLA10755.1
1 600
Architecture
ATT
STR
ATT
ATT 1-261 | STR 262-446 | ATT 447-599 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QLA10755.1
1 600
Domain Start End Length (AA) Confidence
N-terminal 1 199 199 0,9430
Central domain 200 408 210 0,2559
C-terminal 409 600 191 0,9262
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-199
Central
200-408
C-terminal
409-600

Taxonomy

  Name Taxonomy ID Lineage
Phage Shewanella phage Thanatos-2
[NCBI] 		2734809 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QLA10755.1 [NCBI]
Genbank nucleotide accession
MT457553 [NCBI]
CDS location
range 147610 -> 149412
strand +
CDS
ATGAAACAAAGTTTAAACATTGGTAATATGGTCGATGACGGAACAGGTGATTACCTACGTCAGGCAGGCCTTAAAATCAATAACAATACAGATGAATTATATTTTCAATTGGGTGATGGAACATTCCCACACGCCGCTGGAGCTTGGAAAACTTATTCTTCTACACAGGCAACAGATATTTACCCGGTATTTGGACAATCTATTGCAGTTGATACCCAAGTTGCTAGAGTAACGGTTTATTTACCTAAAGGCTCTGTAGCAAAATACAACCAGGTAATACGCCTAAGAGACGTATTTGGGTCATGGCAACGTAATCCTATTTTACTAGTATGTGCAAATACAGATACTATCAAAGGTTCAAGTCAGCCTAGAACAATTAATTCTGAATTTGGTGACCTTGAATTAGTTTATTGTTTTCCAGGTCGTTGGGAATATGTAGAGAATAAACGAGTAGATAGAATCACTAATAGTGATATGGCTACAGTAGCACGTAAAGAATTTATTGCTACTGAAGGCCAAACAGATTTCATGGATGTTTTTGGTGGATATGATTATAATCCAGCTAACCTAGAAGTCTATCACCGTGGTAACTTACTATATTACGGTGGGTTTAATTCAAATAGTGATTATGGTTCACCAGGAACACCAGGACAAATAGTTCCTTTAGATAATAGGAACATTCGACTTAAGAATCCTTGTACAGCAGGCGACTCTGTAATTGTTGTATCGTATATGGATGGGGTCGGTCAATGGCGTAGCTCATATAATCGTAGACAAATTACAGTATTAGACCCTAAGAAAACTTCTTTAGATTCTGTTGAAGGTGCTAGATTGGTTCAAGACCCTTCTACTGTAAAATATATTACAATAGAACAATTTGGTATCGAATCTTTTAGTCCTGTTAATCCTAATGCATTTGAACTTAGTATTAACGGTATTATGCAGCAAGAAGCTGGAACAGGCGGACAAGATATTTACTATTGTGAAGGTGTAACTTCAGATAATGCCCAAGATTGCCAATTGCAAGGTGGTAATTGGGTTATGTCTAATAAAGATTACAGATTAGAAATAGACCCAGACACACTTAAAATAATTGGTATCCATTTCGCAAGGGATTTTGAGCATGAAGATATTATTACCATCGTTTGGTATAACAATAATATCGGAACTACCTTAGAATTAGATGAAATTATTAATGAAACAGATAATTTGTATATTTCACAGGGTGCTGATATTCCTGTTACAGGTGCAGTAGCTATTACAGATTACAATAACCCTGGTTGGCCTAACGTAGAAAAAGTGGATGATTTTATAGGTAAAATTTCAAGCGCATCTTCTTTATTTGATTTCTTCCATCCTGTAGGAACCATTTATGAAAACGCAGTGAATCCTAACAACCCTTCTACTTATATGGGATTTGGTCAATGGATTTTATGGGCTAAAGGAGAAGTATTAGTAGGCTGGAATGATGATATTAGTGATCCTCACTTTGCATATAACAATAATGACTTAGACATCAATGGCAATCCAAGTCATACAGCAGGTGGTACAACAGGCCAAACAAGTACAAGCATCAATAACGATAATCTCCCTGCAACAAAAACTGATAAGAAGGTTCTGGTTGTAGACCCTAATGGTCCTGTTATTGTGGGTGGCTGTCAATATGACCCTGATGACCAAGGCCCAGTTTACACTAAATACCGTGAAGAACAAGCAACTACAAACTTAGAACATCAATCTGTTATTCCAATGTCAAATATACAACCAAGCAGAACAGTATATCGTTGGATGAGAGTTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
83319ace3d303ed93e18eb517081230fad918eb9f62b920c1360d1de481d1407
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6050
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of phage Thanatos infecting and lysing Shewanella oneidensis and promoting nascent biofilm formation Kreienbaum,M., Doerrich,A.K., Brandt,D., Leonhard,T., Hager,F., Brenzinger,S., Hahn,J., Ruwe,M., Briegel,A., Kalinowski,J. and Thormann,K.M. 2020-09-18 — GenBank