Protein

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Genbank accession
YP_010761677.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MPNIMKPTGINAIWSENGQKVDPGAVKVGLGWVTELPPYQTANFIEYKQDLFNAHVNQHGIPEWDSVTEYQGNLSYTQGANGVIYKCLRTHTDKIPTDPLNITSGYWRVAFEDAGEAAKVQANLNQHITNYNTLSGIGNVVIARQNLSVYSRAEGDARYAMKHGNGSNVFSVAPATQPTHAIPLSQLSTLVPPATETVAGVLPIATTIETETGANDSKAISPLKANQVYLKKKDNLAGLGNVTAARANLGLADTATMPSSTFLKADSNFADVPNKALARANLGITSSATQPESYFLRSAQNLADVPNKAQARVNLGLTAMATTAPSAVVMKADNLAGLTNTATARSNLGLGTAATRDTGDFLSSGANLSDLTNIQAARNNLGLKGGATLDVWGLPANTTAMDFQSSQSDIARGWARLPNGLLLQWGTGPGLSDDTRTIVQLPVPARILNVQVTVMGTFNNSIGPGAFMTDMWTNTNFRVSCNWGNWSYPFNWFAITSTL
Physico‐chemical
properties
protein length:499 AA
molecular weight: 53118,03400 Da
isoelectric point:7,01725
aromaticity:0,07415
hydropathy:-0,18798

Domains

Domains [InterPro]
DC_0043
STR
1–331
DC_0043 G3DSA:2.60.40.3940
DC_0362
RBD
319–499
DC_0362
IPR054075
RBD
416–495
IPR054075
YP_010761677.1
1 499
Architecture
STR
RBD
STR 1-331 | RBD 332-499
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage EM
[NCBI] 		2936914 Uroviricota > Caudoviricetes > Vandenendeviridae > Baldwinvirus > Baldwinvirus EM
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010761677.1 [NCBI]
Genbank nucleotide accession
NC_073601.1 [NCBI]
CDS location
range 47593 -> 49092
strand +
CDS
ATGCCAAACATTATGAAGCCAACGGGTATCAACGCTATCTGGTCTGAAAACGGCCAGAAGGTTGACCCGGGTGCTGTAAAAGTTGGTCTCGGGTGGGTGACGGAGCTTCCTCCTTACCAGACTGCCAACTTCATCGAGTACAAACAAGACCTATTTAATGCTCACGTAAACCAGCACGGTATTCCTGAATGGGACAGTGTTACGGAGTACCAAGGGAATCTCAGTTATACTCAAGGCGCCAATGGTGTAATCTACAAGTGTCTGAGAACCCATACAGACAAGATTCCCACTGACCCTCTGAACATCACCTCTGGATACTGGAGAGTAGCGTTCGAGGACGCAGGAGAGGCTGCAAAGGTTCAAGCTAACCTGAATCAGCACATCACCAACTACAACACTCTGTCTGGAATCGGTAATGTAGTTATTGCACGCCAGAACCTTAGCGTGTATAGTAGAGCCGAAGGTGACGCCCGGTATGCAATGAAGCATGGCAACGGGTCTAATGTCTTCAGCGTGGCTCCTGCGACTCAGCCTACGCATGCAATTCCGCTTAGCCAGTTGTCCACTCTGGTGCCTCCTGCGACAGAAACTGTAGCCGGAGTCCTTCCGATTGCAACGACAATTGAGACAGAGACCGGGGCTAATGATTCGAAGGCTATCAGTCCTCTCAAAGCGAACCAAGTCTATCTGAAGAAGAAAGACAACCTTGCTGGTCTTGGTAATGTGACCGCTGCTAGGGCGAATCTAGGGCTGGCCGACACGGCCACGATGCCGTCTAGTACGTTCCTGAAGGCAGATAGTAACTTCGCTGATGTGCCTAACAAGGCGCTGGCAAGGGCTAACCTAGGCATCACCAGCAGCGCCACTCAACCTGAGTCCTACTTCCTTCGAAGCGCTCAGAACCTTGCCGATGTGCCTAACAAGGCTCAAGCCCGGGTCAACCTTGGTCTAACAGCGATGGCTACTACTGCTCCGTCGGCTGTCGTTATGAAAGCAGACAACCTCGCCGGCCTGACCAACACTGCCACCGCTAGGAGCAACCTAGGACTAGGAACTGCCGCAACCAGAGATACAGGAGACTTCCTTTCGTCTGGAGCCAACCTGTCGGACTTGACAAACATTCAAGCTGCTAGGAACAACCTAGGCCTTAAAGGTGGCGCTACACTGGATGTATGGGGACTCCCAGCTAATACAACTGCGATGGACTTCCAGTCCAGTCAATCTGATATCGCCAGAGGATGGGCTAGACTTCCTAACGGTCTCCTCCTACAGTGGGGAACTGGTCCGGGACTATCAGATGATACAAGGACTATCGTCCAACTTCCAGTCCCAGCTAGAATCTTGAACGTGCAGGTGACTGTAATGGGGACGTTTAACAACTCCATCGGTCCGGGCGCTTTCATGACGGATATGTGGACTAACACAAACTTCCGGGTTAGCTGTAACTGGGGCAACTGGTCTTATCCATTCAACTGGTTTGCGATCACATCCACCTTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bda400dc8d78f6f8e2845beb97f80c682bde6873a4faf2774bfbb8f2ffa70b68
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7615
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage-Antibiotic Combinations Against Multidrug-Resistant Pseudomonas aeruginosa Holger,D., Lev,K.L., Kebriaei,R., Morrisette,T., Shah,R., Alexander,J., Lehman,S.M. and Rybak,M.J. 2022 — GenBank