Protein

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Genbank accession
XCO38838.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MPGDPAGVAGIVFGGPTNKAAIVIDARGRIQTYAVVDGKLSAAQISTPIIQGTGYFNNGFEDKIVRFPSAGGEADDLSPGILITTNANGICDFFVVSPNQFNDLGYPTGSALDKQMFKLVKSLDIGTSLQRTIDQYPTVENSASVMYHLFDVNYSGFGPKIVSGILSVGNYVNYTSNVYMVTLNPQNLSAAPSLGPDSIYQWLKVTALHGGQSGWGDSSTTPAVGLVNDPTNSVAKVFLRLPAYGQKISFTPVNVANPNVVTFYYNDLRNNVTVDTPNYLVYSFAERMVTDRFYVRMNNGEVRYSPGTVVRVSGNVTDRLSDKTSDGVFAVGGTYHLANKGRAASISVTNPSTGQYVISGCNLRGDSWKICPPIGFSGTSFGTPPYTVNIVSQGTNTFTIEVKNTAGTLVNIDGFDWLDLHVQPV
Physico‐chemical
properties
protein length:425 AA
molecular weight: 45494,55820 Da
isoelectric point:5,81136
aromaticity:0,10353
hydropathy:-0,05412

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO38838.1
1 425
Domain Start End Length (AA) Confidence
N-terminal 1 55 55 0,9740
Central domain 56 299 245 0,6917
C-terminal 300 425 125 0,9224
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-55
Central
56-299
C-terminal
300-425

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146021
[NCBI] 		3232201 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO38838.1 [NCBI]
Genbank nucleotide accession
PP889471.1 [NCBI]
CDS location
range 145798 -> 147075
strand +
CDS
ATGCCTGGCGACCCTGCGGGTGTAGCGGGAATAGTATTCGGTGGACCCACTAACAAGGCGGCCATCGTCATAGACGCACGCGGCCGCATCCAGACCTACGCCGTGGTTGACGGGAAATTATCCGCCGCACAAATTTCAACGCCTATCATTCAGGGGACGGGGTATTTCAATAATGGGTTTGAGGATAAAATTGTCCGATTCCCATCCGCCGGAGGTGAGGCTGATGACCTAAGCCCCGGCATTCTGATTACTACGAACGCCAACGGAATCTGCGATTTTTTCGTTGTTAGCCCCAACCAGTTTAACGACCTGGGCTACCCAACAGGGTCAGCCCTGGATAAGCAGATGTTCAAGCTGGTTAAATCGTTGGATATCGGTACATCGTTACAACGTACAATTGACCAGTACCCCACAGTAGAAAACTCCGCGTCGGTTATGTACCATCTTTTTGACGTCAATTACTCTGGCTTCGGTCCAAAGATAGTCAGCGGAATTCTGTCGGTCGGTAACTATGTTAATTATACGTCAAATGTTTACATGGTGACGCTGAACCCACAGAACTTGTCGGCAGCCCCCTCCCTGGGTCCCGACAGTATTTACCAGTGGCTGAAAGTGACGGCGCTCCATGGTGGTCAGTCGGGATGGGGGGATTCATCCACAACGCCCGCTGTGGGCCTCGTTAACGACCCTACCAACTCCGTAGCAAAAGTCTTCTTGCGACTGCCTGCGTATGGTCAGAAAATATCGTTCACACCGGTTAACGTTGCCAACCCCAACGTAGTGACATTTTACTACAATGACCTACGAAACAACGTAACGGTTGACACTCCAAATTATCTGGTTTATTCTTTCGCGGAGAGAATGGTAACAGACCGATTTTACGTGCGAATGAATAACGGCGAAGTCCGGTATTCCCCAGGGACTGTAGTTCGCGTCTCAGGAAACGTCACTGACCGTTTATCTGATAAAACGTCTGATGGAGTATTCGCCGTTGGTGGAACGTATCACCTGGCTAATAAAGGCCGCGCGGCAAGTATTTCCGTCACTAACCCGTCAACAGGCCAGTACGTTATCAGCGGATGCAATTTACGCGGTGATAGCTGGAAGATTTGCCCACCGATTGGTTTTTCAGGTACGTCATTCGGCACACCACCGTACACGGTTAACATCGTCTCTCAAGGGACGAATACATTCACCATTGAGGTCAAGAACACTGCTGGTACGTTGGTAAATATCGATGGTTTTGACTGGCTGGACCTGCACGTTCAGCCAGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d517776783db139d030e8676dac1d75d566e12935268f5eec6f68b98ce01bac1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3492
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank