Protein

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Genbank accession
WVO01533.1 [GenBank]
Protein name
regulator of chromosome condensation
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MIPFARILDYGNTLPDAKIVQFCGLNYFALYIDSIGNLFALGDNSQGQLGTGDSAPLSEWRLIAGNIKKVVCATDMSVIIQGNDGQYYISGNRTCLGLNSNVYSFTKLPFTIPSDAYNITATLNNMAYLIPNSTDRTYGDLYMVGRNSTYSLSNKVALNGMLSVPTLMVSRVKDVQLYNGITAYRKWFSAYDVICGFGNAPSMLGTSPTPNEVQVASAPRTSNISWSLMPSAVMSINQSWIYGAGLGTYYCMGNGSTAQIGITSLYSMVGANKFFNHPYSILTRYGTFFSVNNDLYCTGNNTSGQLGLGNKVTPQNKTIINLPDELVLNDIIGICANSTNTMIITRNTIWYSGSSFPSLSQDTTTFTKLSLGAEVDIKSIN
Physico‐chemical
properties
protein length:381 AA
molecular weight: 41378,51900 Da
isoelectric point:7,46486
aromaticity:0,10761
hydropathy:0,02283

Domains

Domains [InterPro]
DC_0433
ATT
1–138
DC_0433 DC_1778
IPR009091
STR
10–273
IPR009091 IPR009091
IPR051553
Unmapped
16–352
IPR051553
IPR009091
STR
16–352
IPR009091
IPR000408
STR
36–83
IPR000408 IPR000408
WVO01533.1
1 381
Architecture
ATT
STR
ATT 1-138 | STR 139-381
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVO01533.1
1 381
Domain Start End Length (AA) Confidence
N-terminal 1 162 162 0,1636
Central domain 163 370 209 0,6606
C-terminal 371 381 10 0,3845
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-162
Central
163-370
C-terminal
371-381

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PHA46
[NCBI] 		3117424 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhimurium str. ATCC 14028
[NCBI] 		1299114 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVO01533.1 [NCBI]
Genbank nucleotide accession
PP191103 [NCBI]
CDS location
range 54960 -> 56105
strand -
CDS
ATGATACCGTTTGCTAGGATATTGGATTATGGGAACACATTACCGGATGCAAAAATAGTTCAATTCTGTGGATTGAATTATTTTGCATTATATATAGATTCTATTGGTAATTTATTTGCATTAGGGGATAATAGTCAGGGTCAATTGGGTACTGGTGATTCTGCACCATTATCTGAATGGAGATTGATTGCAGGTAATATTAAAAAAGTGGTATGTGCTACTGATATGAGTGTGATCATTCAAGGAAATGATGGTCAGTACTATATATCTGGCAACCGCACATGTTTAGGGCTTAATAGTAATGTATATAGTTTTACCAAACTTCCCTTTACTATTCCTAGTGATGCTTATAACATTACAGCTACTTTAAACAACATGGCTTATTTAATACCGAATTCGACTGATCGCACATATGGTGATTTATATATGGTTGGTAGGAATAGTACTTATAGTTTAAGTAATAAGGTTGCCTTAAATGGAATGTTATCAGTACCTACTTTAATGGTTTCTAGGGTTAAAGATGTACAGCTTTATAATGGCATAACGGCTTATCGAAAATGGTTCAGTGCATATGATGTTATCTGTGGTTTTGGTAATGCACCATCGATGCTTGGAACATCACCTACGCCGAATGAAGTACAAGTTGCTTCTGCTCCTAGAACTTCTAACATTTCATGGAGTTTAATGCCATCGGCGGTTATGTCTATTAATCAAAGTTGGATATATGGAGCGGGATTAGGTACTTATTATTGCATGGGTAATGGAAGTACAGCCCAAATTGGTATTACGAGTTTGTATAGTATGGTTGGTGCTAATAAGTTTTTCAATCATCCATATTCTATATTAACACGTTATGGTACATTTTTTAGTGTGAATAATGATTTATATTGTACTGGAAATAATACAAGTGGACAATTGGGTTTAGGTAATAAGGTTACGCCCCAAAATAAGACAATTATTAATTTACCAGATGAGTTAGTACTTAATGATATAATTGGAATATGTGCTAATTCAACTAATACTATGATAATAACTAGAAATACAATTTGGTATAGTGGTTCTTCTTTTCCTTCCTTAAGTCAAGATACAACTACCTTTACTAAATTGTCATTGGGTGCAGAAGTTGATATTAAATCTATTAATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
daebc09ab0821f823d3ce81e7bed9870213831e7a33092dc1aec4005acf1d6fa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8104
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and efficacy of Salmonella phage PHA46 cocktail in the control of Salmonella Newport and Typhimurium internalized into cherry tomatoes Arista-Regalado,A.D., Viera-Segura,O., Aguilar-Montes de Oca,S., Hernandez,L., Gonzalez-Aguilar,D. and Barba-Leon,J. 2024-07 — GenBank