Protein

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Genbank accession
XYL02697.1 [GenBank]
Protein name
non-contractile tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALVSQTTKNLKSGISQQPDILRYPEQGAVQINGWSSETEGLQKRPPLVFSKVLGAKGYLGTNPYIHLINRDEFEQYYACFTGTGVKVFDLTGNEYIVRGDTSYVTVANPREDLRMVTIADYTFIVNRTKVVDTLPDVSLPNFREKGSALINIRGGQYGRTLLVYLNDDVEEVAKLELPNGSEPWHVNQTDSQYIAEELAKQIRLKLPTWTITVGTGYVYIEAPVGTDINKFITKDGYADQLIAPVTHFAQSFNKLPANAPDGYIIKIVGDTSKTADQYYVKWDAARKVWGETIGWGSEYKLDPVTMPWALVRAEDGNFDLKMNTWTERKCGDEDTNPFPSFVDAKINDVFFWRNRLGFLSGENVILSRTAKYFGFFPTSVANLSDDDPIDVAVSHNRVSTLKYAVPFTEEMLIWADEAQFVMNAQGVLSSRSVELNLTTQFDVYDKARPYGIGRNIYFASPRATFTSINRYYAVQDVSSVKNAEDMTSHVPSYIPNGVFQIHGSATENYASVLTSGAESKVFLYKFLYQNETLQQQSWSHWDFGDNIRILSAASINSTMFLILENNGHVFTGYVLFTKDTVDYQGEPYRGYLDGKKAYTVPVGAYNADTNETTVNISTVYGMGFDKGTISALEADGRVTSFEEPQGGWAANPTITFDGNLEGVTLFLGFNFLFTYEFSKFLIKKQADDGSIASEDTGRLQLRRAWVNYEDSGAFRIEVQNQSRTFEYLMGGARVGSQGLRASRLNVATGQYRFPVNGDARLNTVRIFSDYTTPLNVIGCGWEGNYMKRTTGI
Physico‐chemical
properties
protein length:793 AA
molecular weight: 88843,49480 Da
isoelectric point:5,17493
aromaticity:0,12610
hydropathy:-0,30971

Domains

Domains [InterPro]
IPR058003
TTP
1–793
IPR058003
XYL02697.1
1 793
Architecture
TTP
TTP 1-793
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYL02697.1
1 793
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9951
Central domain 141 347 208 0,2417
C-terminal 348 793 445 0,1259
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-347
C-terminal
348-793

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage Pcc_P10
[NCBI] 		3446690 No lineage information
Host Pectobacterium carotovorum subsp. carotovorum
[NCBI] 		555 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Pectobacterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYL02697.1 [NCBI]
Genbank nucleotide accession
PV827587 [NCBI]
CDS location
range 23968 -> 26349
strand +
CDS
ATGGCCTTAGTATCACAAACAACAAAGAACCTGAAGTCTGGTATCAGCCAACAACCAGACATCTTACGGTATCCAGAGCAGGGAGCAGTACAGATTAACGGTTGGTCATCCGAGACTGAAGGCCTCCAAAAGAGACCACCTTTAGTGTTCAGTAAGGTTCTGGGCGCTAAGGGATACTTGGGCACCAACCCATATATTCACCTAATCAACCGCGATGAATTCGAGCAGTATTACGCTTGCTTCACAGGGACAGGCGTTAAGGTGTTTGACTTGACTGGTAATGAGTACATCGTGCGCGGTGATACCTCATACGTCACCGTAGCGAACCCAAGGGAAGACTTAAGGATGGTCACCATCGCCGACTACACGTTCATCGTTAACCGAACCAAGGTGGTCGACACTCTCCCTGATGTGTCCCTTCCGAACTTCAGAGAGAAAGGCTCAGCGCTGATTAATATTCGTGGTGGTCAATACGGGCGTACACTGCTGGTGTATCTCAATGATGACGTTGAGGAGGTTGCTAAGCTGGAACTTCCAAACGGTAGTGAACCTTGGCACGTTAATCAAACAGACTCACAGTACATCGCTGAGGAGTTGGCTAAACAGATTCGCCTTAAGTTGCCCACTTGGACAATCACGGTCGGTACTGGTTATGTCTACATTGAGGCACCAGTGGGTACGGACATCAATAAGTTCATCACTAAGGATGGCTATGCAGACCAATTGATTGCTCCTGTGACTCACTTTGCACAGTCATTCAATAAGCTCCCAGCGAATGCACCTGATGGTTACATTATCAAAATCGTAGGGGACACCTCCAAGACTGCCGACCAGTATTACGTTAAGTGGGATGCAGCTCGTAAGGTCTGGGGTGAAACCATCGGCTGGGGTTCTGAATATAAGCTCGACCCTGTGACCATGCCTTGGGCTTTGGTACGTGCAGAAGACGGTAACTTTGACCTTAAGATGAACACTTGGACTGAACGCAAATGTGGTGATGAGGATACTAACCCATTCCCATCGTTCGTAGACGCCAAGATTAACGATGTGTTCTTCTGGCGTAACCGCTTAGGGTTCCTTAGTGGTGAGAACGTTATTCTGTCTCGTACAGCCAAATACTTCGGGTTCTTCCCAACGAGCGTTGCGAACCTCAGTGACGATGACCCGATTGATGTTGCGGTCAGCCATAACCGAGTGTCAACCCTTAAGTACGCCGTACCGTTCACTGAGGAGATGCTTATCTGGGCTGATGAAGCGCAGTTCGTTATGAACGCTCAAGGTGTTCTATCTAGCCGTAGCGTAGAGCTGAACCTCACGACTCAGTTTGACGTGTATGATAAAGCGCGACCTTATGGTATCGGGCGTAACATCTACTTCGCGTCTCCTCGGGCAACCTTTACGAGCATCAACCGATACTACGCTGTTCAGGACGTCTCCAGTGTTAAGAACGCTGAGGACATGACCAGCCACGTACCGAGTTATATCCCTAACGGTGTCTTCCAGATTCACGGGTCGGCTACCGAGAATTACGCCAGCGTGTTAACTTCAGGGGCAGAGTCGAAAGTATTTCTCTATAAGTTCCTCTATCAGAATGAGACGCTACAGCAGCAATCATGGTCTCATTGGGACTTTGGGGATAACATTCGGATTCTCTCTGCGGCGTCCATTAACTCCACCATGTTCCTCATTCTGGAGAACAATGGGCACGTCTTTACGGGCTACGTCCTCTTCACGAAGGACACTGTGGATTATCAAGGTGAACCTTACCGTGGCTATCTAGATGGCAAGAAAGCCTACACGGTGCCTGTAGGTGCCTACAATGCGGATACCAACGAGACCACTGTGAACATCTCAACGGTGTACGGTATGGGATTTGATAAGGGAACTATCAGTGCACTTGAGGCTGACGGTCGTGTGACCTCCTTTGAGGAGCCACAAGGAGGCTGGGCGGCTAACCCTACGATTACCTTTGATGGCAACCTTGAGGGAGTAACACTGTTCCTCGGGTTCAACTTCCTGTTCACTTATGAGTTCTCCAAGTTCCTCATTAAGAAGCAGGCTGATGATGGTTCCATTGCCTCAGAGGACACTGGTAGATTACAGCTCCGAAGGGCGTGGGTAAACTATGAGGACTCCGGTGCGTTCCGTATTGAGGTTCAGAACCAATCGAGAACCTTTGAGTATCTTATGGGAGGTGCTCGTGTAGGGTCTCAAGGCCTCAGGGCGTCCCGCCTCAATGTGGCTACTGGTCAGTATCGATTCCCTGTAAATGGGGACGCAAGGTTGAACACTGTGAGAATCTTCAGTGACTACACAACACCACTAAACGTTATTGGCTGTGGCTGGGAGGGCAATTACATGAAGAGAACCACAGGTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cdb2fc4343925ca907c0d21a7d7ef2089a5cdc4e853fcad134c2cc34b84733f7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8592
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50